RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 GMDSO60547 372 aa1□□□□□ -2.25
SCFD1-216ENST00000555550 IGKV1D-33P01593 117 aa1□□□□□ -2.25
SCFD1-216ENST00000555550 IGKV1-33P01594 117 aa1□□□□□ -2.25
SCFD1-216ENST00000555550 STAG3L3P0CL85 134 aa1□□□□□ -2.25
SCFD1-216ENST00000555550 SLC18A1P54219 525 aa1□□□□□ -2.25
SCFD1-216ENST00000555550 GABRA6Q16445 453 aa1□□□□□ -2.25
SCFD1-216ENST00000555550 FBXL19-AS1Q494R0 122 aa1□□□□□ -2.25
SCFD1-216ENST00000555550 FAM231DQ6ZW35 169 aa1□□□□□ -2.25
SCFD1-216ENST00000555550 EIF3MQ7L2H7 374 aaKnown RBP1□□□□□ -2.25
SCFD1-216ENST00000555550 LUZP2Q86TE4 346 aa1□□□□□ -2.25
SCFD1-216ENST00000555550 COMMD1Q8N668 190 aa1□□□□□ -2.25
SCFD1-216ENST00000555550 GPX8Q8TED1 209 aa1□□□□□ -2.25
SCFD1-216ENST00000555550 NAT6Q93015 286 aa1□□□□□ -2.25
SCFD1-216ENST00000555550 UBE2E2Q96LR5 201 aa1□□□□□ -2.25
SCFD1-216ENST00000555550 JSRP1Q96MG2 331 aaPredicted RBP1□□□□□ -2.25
SCFD1-216ENST00000555550 AGMATQ9BSE5 352 aa1□□□□□ -2.25
SCFD1-216ENST00000555550 CHID1Q9BWS9 393 aa1□□□□□ -2.25
SCFD1-216ENST00000555550 ARV1Q9H2C2 271 aa1□□□□□ -2.25
SCFD1-216ENST00000555550 FBXO44Q9H4M3 255 aa1□□□□□ -2.25
SCFD1-216ENST00000555550 MYEF2Q9P2K5 600 aaKnown RBP1□□□□□ -2.25
SCFD1-216ENST00000555550 TAC3Q9UHF0 121 aa1□□□□□ -2.25
SCFD1-216ENST00000555550 SETD1AO15047 1707 aaKnown RBP0.99□□□□□ -2.25
SCFD1-216ENST00000555550 IGHV3-21A0A0B4J1V1 117 aa0.99□□□□□ -2.25
SCFD1-216ENST00000555550 WRBO00258 174 aa0.99□□□□□ -2.25
SCFD1-216ENST00000555550 TRDMT1O14717 391 aaKnown RBP0.99□□□□□ -2.25
SCFD1-216ENST00000555550 CASQ2O14958 399 aaPredicted RBP0.99□□□□□ -2.25
SCFD1-216ENST00000555550 KDELR3O43731 214 aa0.99□□□□□ -2.25
SCFD1-216ENST00000555550 OR2A4O95047 310 aa0.99□□□□□ -2.25
SCFD1-216ENST00000555550 S1PR2O95136 353 aa0.99□□□□□ -2.25
SCFD1-216ENST00000555550 OTCP00480 354 aa0.99□□□□□ -2.25
SCFD1-216ENST00000555550 CATP04040 527 aaKnown RBP0.99□□□□□ -2.25
SCFD1-216ENST00000555550 GFAPP14136 432 aa0.99□□□□□ -2.25
SCFD1-216ENST00000555550 RPL10AP62906 217 aaKnown RBP0.99□□□□□ -2.25
SCFD1-216ENST00000555550 SLC35A1P78382 337 aa0.99□□□□□ -2.25
SCFD1-216ENST00000555550 PRDX4Q13162 271 aa0.99□□□□□ -2.25
SCFD1-216ENST00000555550 IL18Q14116 193 aa0.99□□□□□ -2.25
SCFD1-216ENST00000555550 RCN1Q15293 331 aa0.99□□□□□ -2.25
SCFD1-216ENST00000555550 LINC00303Q3SY05 128 aa0.99□□□□□ -2.25
SCFD1-216ENST00000555550 MRPL21Q7Z2W9 205 aaKnown RBP0.99□□□□□ -2.25
SCFD1-216ENST00000555550 LYZL2Q7Z4W2 148 aa0.99□□□□□ -2.25
SCFD1-216ENST00000555550 TMCO2Q7Z6W1 182 aaPredicted RBP0.99□□□□□ -2.25
SCFD1-216ENST00000555550 ZNF738Q8NE65 137 aa0.99□□□□□ -2.25
SCFD1-216ENST00000555550 OR8A1Q8NGG7 326 aa0.99□□□□□ -2.25
SCFD1-216ENST00000555550 CACNG8Q8WXS5 425 aa0.99□□□□□ -2.25
SCFD1-216ENST00000555550 OR2A7Q96R45 310 aa0.99□□□□□ -2.25
SCFD1-216ENST00000555550 SRRQ9GZT4 340 aa0.99□□□□□ -2.25
SCFD1-216ENST00000555550 ADA2Q9NZK5 511 aa0.99□□□□□ -2.25
SCFD1-216ENST00000555550 VAX2Q9UIW0 290 aa0.99□□□□□ -2.25
SCFD1-216ENST00000555550 OR51B2Q9Y5P1 312 aa0.99□□□□□ -2.25
SCFD1-216ENST00000555550 KMT2EQ8IZD2 1858 aa0.99□□□□□ -2.25
SCFD1-216ENST00000555550 TRAV8-4A0A0B4J246 113 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 A0A0B4J2E0 115 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 LRRIQ4A6NIV6 560 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 SLC22A20A6NK97 555 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 GOLGA8TH3BQL2 631 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 ISLRO14498 428 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 NDUFS5O43920 106 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 P01737 135 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 CD82P27701 267 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 ARL2P36404 184 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 XIAPP98170 497 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 RAD51Q06609 339 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 DOC2AQ14183 400 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 PMVKQ15126 192 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 RAB11BQ15907 218 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 TTMPQ5BVD1 217 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 HS3ST5Q8IZT8 346 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 CMTM8Q8IZV2 173 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 ZFP82Q8N141 532 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 ZNF321PQ8N8H1 164 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 OR52K1Q8NGK4 314 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 LMX1AQ8TE12 382 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 C2orf15Q8WU43 125 aaKnown RBP0.98□□□□□ -2.25
SCFD1-216ENST00000555550 TMIGD2Q96BF3 282 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 TTTY12Q9BZ98 90 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 KIR3DX1Q9H7L2 352 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 RPRD1BQ9NQG5 326 aaKnown RBP0.98□□□□□ -2.25
SCFD1-216ENST00000555550 PXMP2Q9NR77 195 aa0.98□□□□□ -2.25
SCFD1-216ENST00000555550 RBM22Q9NW64 420 aaKnown RBP eCLIP0.98□□□□□ -2.25
SCFD1-216ENST00000555550 MUC5BQ9HC84 5762 aaPredicted RBP0.98□□□□□ -2.25
SCFD1-216ENST00000555550 FLG2Q5D862 2391 aaPredicted RBP0.98□□□□□ -2.25
SCFD1-216ENST00000555550 GBF1Q92538 1859 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 A0A0J9YYE9 177 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 A0A1W2PRD5 423 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 A8MWP4 228 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 SUPT3HB4E1H0 165 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 H3BMM0 161 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 RNF113AO15541 343 aaKnown RBP0.97□□□□□ -2.25
SCFD1-216ENST00000555550 PTTG1O95997 202 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 TRBC1P01850 177 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 KLK1P06870 262 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 UBCP0CG48 685 aaKnown RBP0.97□□□□□ -2.25
SCFD1-216ENST00000555550 PEX19P40855 299 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 GPR1P46091 355 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 ATP5J2P56134 94 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 TAS2R39P59534 338 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 ATP6V0D1P61421 351 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 RPL18AQ02543 176 aaKnown RBP0.97□□□□□ -2.25
SCFD1-216ENST00000555550 BCL2A1Q16548 175 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 CYHR1Q6ZMK1 362 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms