RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 RBFOX1Q9NWB1 397 aaKnown RBP11.23□□□□□ -0.61
SNX6-203ENST00000555416 PSORS1C1Q9UIG5 152 aa11.23□□□□□ -0.61
SNX6-203ENST00000555416 KPTNQ9Y664 436 aa11.23□□□□□ -0.61
SNX6-203ENST00000555416 HSPE1-MOB4S4R3N1 261 aa11.23□□□□□ -0.61
SNX6-203ENST00000555416 IGHV1-69DA0A0B4J2H0 117 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 MEX3AA1L020 520 aaKnown RBP11.22□□□□□ -0.61
SNX6-203ENST00000555416 RNASEK-C17orf49H0YIS7 233 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 OGG1O15527 345 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 KNG1P01042 644 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 IGHV1-69P01742 117 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 PRKACBP22694 351 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 DUSP1P28562 367 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 SOX2P48431 317 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 RBP2P50120 134 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 CAPZA1P52907 286 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 ATP1B3P54709 279 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 MTCP1P56278 107 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 ERVFRD-1P60508 538 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 COL10A1Q03692 680 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 ST3GAL4Q11206 333 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 PDZK1IP1Q13113 114 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 BAMBIQ13145 260 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 CDK5R1Q15078 307 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 SLC9A3R2Q15599 337 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 PNKDQ8N490 385 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 KIR3DL3Q8N743 410 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 OR4M1Q8NGD0 313 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 OR51A2Q8NGJ7 313 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 OR5D18Q8NGL1 313 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 FAM216AQ8WUB2 273 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 ZFAND2BQ8WV99 257 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 SGCDQ92629 289 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 ORAI1Q96D31 301 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 TMEM80Q96HE8 168 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 OPALINQ96PE5 141 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 PRDM13Q9H4Q3 707 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 ZCCHC4Q9H5U6 513 aa11.22□□□□□ -0.61
SNX6-203ENST00000555416 A0A1W2PRD5 423 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 A0A1W2PRF3 423 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 A0A1W2PRM7 423 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 TMEM82A0PJX8 343 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 TRIM77I1YAP6 450 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 ZNF737O75373 536 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 MT-ND2P03891 347 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 TK1P04183 234 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 CCDC159P0C7I6 412 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 C21orf33P30042 268 aaPredicted RBP11.21□□□□□ -0.61
SNX6-203ENST00000555416 SNU13P55769 128 aaKnown RBP11.21□□□□□ -0.61
SNX6-203ENST00000555416 MRPL28Q13084 256 aaKnown RBP11.21□□□□□ -0.61
SNX6-203ENST00000555416 PDCD1Q15116 288 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 TMEM200BQ69YZ2 307 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 HCP5Q6MZN7 132 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 ZNF529Q6P280 563 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 RPL22L1Q6P5R6 122 aaKnown RBP11.21□□□□□ -0.61
SNX6-203ENST00000555416 RBMS3Q6XE24 437 aaKnown RBP11.21□□□□□ -0.61
SNX6-203ENST00000555416 LHFPL2Q6ZUX7 228 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 AHSA2Q719I0 299 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 FAM185AQ8N0U4 392 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 ZNF561Q8N587 486 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 C11orf42Q8N5U0 333 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 PARP16Q8N5Y8 322 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 BPIFB6Q8NFQ5 453 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 TSEN15Q8WW01 171 aaKnown RBP11.21□□□□□ -0.61
SNX6-203ENST00000555416 EMG1Q92979 244 aaKnown RBP11.21□□□□□ -0.61
SNX6-203ENST00000555416 SPSB1Q96BD6 273 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 JMJD8Q96S16 334 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 COMMD4Q9H0A8 199 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 FKBP14Q9NWM8 211 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 BABAM2Q9NXR7 383 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 DHDHQ9UQ10 334 aa11.21□□□□□ -0.61
SNX6-203ENST00000555416 EXOSC1Q9Y3B2 195 aaKnown RBP11.21□□□□□ -0.61
SNX6-203ENST00000555416 A0A0U1RQK1 487 aa11.2□□□□□ -0.62
SNX6-203ENST00000555416 A0A1W2PQ09 198 aa11.2□□□□□ -0.62
SNX6-203ENST00000555416 K7N7A8 449 aa11.2□□□□□ -0.62
SNX6-203ENST00000555416 SLC1A7O00341 560 aa11.2□□□□□ -0.62
SNX6-203ENST00000555416 HOXA3O43365 443 aaPredicted RBP11.2□□□□□ -0.62
SNX6-203ENST00000555416 PIPP12273 146 aaPredicted RBP11.2□□□□□ -0.62
SNX6-203ENST00000555416 CCL3L1P16619 93 aa11.2□□□□□ -0.62
SNX6-203ENST00000555416 PRTN3P24158 256 aa11.2□□□□□ -0.62
SNX6-203ENST00000555416 ZNF273Q14593 569 aa11.2□□□□□ -0.62
SNX6-203ENST00000555416 CCDC58Q4VC31 144 aa11.2□□□□□ -0.62
SNX6-203ENST00000555416 DMKNQ6E0U4 476 aaPredicted RBP11.2□□□□□ -0.62
SNX6-203ENST00000555416 TMPRSS11AQ6ZMR5 421 aa11.2□□□□□ -0.62
SNX6-203ENST00000555416 C17orf107Q6ZR85 190 aa11.2□□□□□ -0.62
SNX6-203ENST00000555416 OR52N1Q8NH53 320 aa11.2□□□□□ -0.62
SNX6-203ENST00000555416 DMRTB1Q96MA1 342 aa11.2□□□□□ -0.62
SNX6-203ENST00000555416 MYCBPQ99417 103 aaPredicted RBP11.2□□□□□ -0.62
SNX6-203ENST00000555416 TNFRSF19Q9NS68 423 aa11.2□□□□□ -0.62
SNX6-203ENST00000555416 PLCXD1Q9NUJ7 323 aa11.2□□□□□ -0.62
SNX6-203ENST00000555416 TAS2R4Q9NYW5 299 aa11.2□□□□□ -0.62
SNX6-203ENST00000555416 TRBV23-1A0A0A0MS06 115 aa11.19□□□□□ -0.62
SNX6-203ENST00000555416 IRGMA1A4Y4 181 aa11.19□□□□□ -0.62
SNX6-203ENST00000555416 EFCAB10A6NFE3 127 aa11.19□□□□□ -0.62
SNX6-203ENST00000555416 SULT1B1O43704 296 aa11.19□□□□□ -0.62
SNX6-203ENST00000555416 PSPNO60542 156 aa11.19□□□□□ -0.62
SNX6-203ENST00000555416 HAND1O96004 215 aa11.19□□□□□ -0.62
SNX6-203ENST00000555416 PRKACAP17612 351 aa11.19□□□□□ -0.62
SNX6-203ENST00000555416 MYL12AP19105 171 aa11.19□□□□□ -0.62
SNX6-203ENST00000555416 ZP1P60852 638 aa11.19□□□□□ -0.62
SNX6-203ENST00000555416 RPS11P62280 158 aaKnown RBP eCLIP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms