RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 B2MP61769 119 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 RPL23P62829 140 aaKnown RBP1.61□□□□□ -2.15
SRP54-204ENST00000553923 PRR3P79522 188 aaKnown RBP1.61□□□□□ -2.15
SRP54-204ENST00000553923 IFITM3Q01628 133 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 C4orf26Q17RF5 130 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 Q1RN00 199 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 C6orf99Q4VX62 202 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 ORMDL2Q53FV1 153 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 CLEC12AQ5QGZ9 265 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 ATAD3CQ5T2N8 411 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 TMEM236Q5W0B7 351 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 STEAP4Q687X5 459 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 KDM4DQ6B0I6 523 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 SPOPLQ6IQ16 392 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 CGB2Q6NT52 195 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 OPN5Q6U736 354 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 LRRN1Q6UXK5 716 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 DGAT2L6Q6ZPD8 337 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 RASSF6Q6ZTQ3 369 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 FAM231DQ6ZW35 169 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 MDP1Q86V88 176 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 COMMD7Q86VX2 200 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 UBALD2Q8IYN6 164 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 C11orf42Q8N5U0 333 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 OR5B17Q8NGF7 314 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 STOML3Q8TAV4 291 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 C7orf33Q8WU49 177 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 HGDQ93099 445 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 TM4SF18Q96CE8 201 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 SMIM12Q96EX1 92 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 FMC1Q96HJ9 113 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 TIMM17AQ99595 171 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 PHB2Q99623 299 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 PITX2Q99697 317 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 DOK1Q99704 481 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 HSD17B10Q99714 261 aaKnown RBP1.61□□□□□ -2.15
SRP54-204ENST00000553923 DHRS9Q9BPW9 319 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 DEFB126Q9BYW3 111 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 OR51B6Q9H340 312 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 HEBP1Q9NRV9 189 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 ZNF226Q9NYT6 803 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 TMEM9Q9P0T7 183 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 NUFIP1Q9UHK0 495 aaKnown RBP1.61□□□□□ -2.15
SRP54-204ENST00000553923 C14orf166Q9Y224 244 aaKnown RBP1.61□□□□□ -2.15
SRP54-204ENST00000553923 SIGLEC7Q9Y286 467 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.61□□□□□ -2.15
SRP54-204ENST00000553923 SAMHD1Q9Y3Z3 626 aaKnown RBP1.61□□□□□ -2.15
SRP54-204ENST00000553923 TDRD6O60522 2096 aaKnown RBP1.61□□□□□ -2.15
SRP54-204ENST00000553923 TTC21AQ8NDW8 1320 aa1.61□□□□□ -2.15
SRP54-204ENST00000553923 TRAV8-2A0A0B4J237 113 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 IGKV1-8A0A0C4DH67 115 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 ZNF233A6NK53 670 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 VGLL3A8MV65 326 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 SYNGR1O43759 233 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 SPAG7O75391 227 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 SERPINB7O75635 380 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 GATBO75879 557 aaKnown RBP1.6□□□□□ -2.15
SRP54-204ENST00000553923 ARL6IP5O75915 188 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 KRT75O95678 551 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 LY6G6DO95868 133 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 SERPINA1P01009 418 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 INSP01308 110 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 TRBV12-3P01733 135 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 HLA-DRAP01903 254 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 TCRBP04435 133 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 IFNA16P05015 189 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 CDK1P06493 297 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 M6PRP20645 277 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 DTYMKP23919 212 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 CCNE1P24864 410 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 CXCR1P25024 350 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 HTR1EP28566 365 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 RPL12P30050 165 aaKnown RBP1.6□□□□□ -2.15
SRP54-204ENST00000553923 SSTR5P35346 364 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 PMELP40967 661 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 CBX5P45973 191 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 LGALS7P47929 136 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 GCLMP48507 274 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 UBE2AP49459 152 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 SLC18A1P54219 525 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 SYNJ2BPP57105 145 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 CXCR4P61073 352 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 HERVK_113P61574 105 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 LSM6P62312 80 aaKnown RBP1.6□□□□□ -2.15
SRP54-204ENST00000553923 BAXQ07812 192 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 ERCC8Q13216 396 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 KIAA0040Q15053 153 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 TOMM34Q15785 309 aaPredicted RBP1.6□□□□□ -2.15
SRP54-204ENST00000553923 CEACAM16Q2WEN9 425 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 TMEM176BQ3YBM2 270 aaPredicted RBP1.6□□□□□ -2.15
SRP54-204ENST00000553923 SPIN3Q5JUX0 258 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 UBE2NLQ5JXB2 153 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 HACD4Q5VWC8 232 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 ZNF773Q6PK81 442 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 CD200R1LQ6Q8B3 271 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 ACP7Q6ZNF0 438 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 TGIF2LYQ8IUE0 185 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 CPNE9Q8IYJ1 553 aa1.6□□□□□ -2.15
SRP54-204ENST00000553923 ZCCHC24Q8N2G6 241 aaKnown RBP1.6□□□□□ -2.15
SRP54-204ENST00000553923 STPG2Q8N412 459 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms