RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 PLEKHJ1Q9NW61 149 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 OSGIN2Q9Y236 505 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 U3KQ87 197 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 SHANK1Q9Y566 2161 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 A0A096LPE4 126 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 IGKV1-12A0A0C4DH73 117 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 A0A1W2PPZ6 126 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 C9orf170A2RU37 121 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 TUBAL3A6NHL2 446 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 RFPL4AA6NLU0 287 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 RFPL4AL1F8VTS6 287 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 HTR3BO95264 441 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 DUS4LO95620 317 aaKnown RBP5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 IGKV1D-12P01611 117 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 IGHV3-9P01782 118 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 HLA-HP01893 362 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 PMP2P02689 132 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 SLC25A4P12235 298 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 PPP3CBP16298 524 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 HOXA5P20719 270 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 TUBG1P23258 451 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 FPR2P25090 351 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 CHATP28329 748 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 CALCRP30988 508 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 SNU13P55769 128 aaKnown RBP5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 IL13RA1P78552 427 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 TGFBR3Q03167 851 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 FGL1Q08830 312 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 MALLQ13021 153 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 ARFRP1Q13795 201 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 AADACL3Q5VUY0 350 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 ZNF660Q6AZW8 331 aaPredicted RBP5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 TMEM211Q6ICI0 200 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 Q6ZS49 121 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 VASH2Q86V25 355 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 SLC7A5P1Q8MH63 180 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 OSR2Q8N2R0 312 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 OR5M8Q8NGP6 311 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 OR5H2Q8NGV7 314 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 OR51F2Q8NH61 342 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 GTF3AQ92664 365 aaKnown RBP5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 EMG1Q92979 244 aaKnown RBP5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 PHB2Q99623 299 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 SLX1AQ9BQ83 275 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 FN3KRPQ9HA64 309 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 TUBG2Q9NRH3 451 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 PLSCR4Q9NRQ2 329 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 DLL3Q9NYJ7 618 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 SLC23A1Q9UHI7 598 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 PRSS50Q9UI38 385 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 STARD10Q9Y365 291 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 MPC1Q9Y5U8 109 aa5.17□□□□□ -1.58
VIPAS39-204ENST00000553576 FAM230AA0A1W2PPH8 454 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 C5orf49A4QMS7 147 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 LINC00862A6NCI5 91 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 ZNF850A8MQ14 1090 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 F5H5P2 479 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 SPRY1O43609 319 aaPredicted RBP5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 PDCD6O75340 191 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 NGFP01138 241 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 IFNA7P01567 189 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 GLAP06280 429 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 ACAA1P09110 424 aaPredicted RBP5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 CD79AP11912 226 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 RPA2P15927 270 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 ZNF14P17017 642 aaPredicted RBP5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 AMY2BP19961 511 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 FUT3P21217 361 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 SDHBP21912 280 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 CD34P28906 385 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 APLNRP35414 380 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 EIF2S3P41091 472 aaKnown RBP5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 KIR2DL2P43627 348 aaPredicted RBP5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 OR3A3P47888 321 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 UCP3P55916 312 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 RBM11P57052 281 aaKnown RBP5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 SEC61A1P61619 476 aaKnown RBP5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 TSPAN5P62079 268 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 SNRPD2P62316 118 aaKnown RBP5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 CYCSP99999 105 aaKnown RBP5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 SRSF6Q13247 344 aaKnown RBP5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 PPP1R1AQ13522 171 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 OPCMLQ14982 345 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 C3AR1Q16581 482 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 NKPD1Q17RQ9 610 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 SCGB2B2Q4G0G5 96 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 FAM76BQ5HYJ3 339 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 DMRTC1Q5HYR2 192 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 C1QTNF12Q5T7M4 302 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 OR2A2Q6IF42 318 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 INO80CQ6PI98 192 aaPredicted RBP5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 TFAP2EQ6VUC0 442 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 FBXW12Q6X9E4 464 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 Q6ZS92 163 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 Q6ZT83 130 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 FAM214BQ7L5A3 538 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 C6orf201Q7Z4U5 140 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 LINC00596Q86U02 117 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 RTN4RL2Q86UN3 420 aa5.16□□□□□ -1.58
VIPAS39-204ENST00000553576 MKXQ8IYA7 352 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms