RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 FAM216BQ8N7L0 139 aa9.17□□□□□ -0.94
SUPT16H-202ENST00000552829 NANOGP1Q8N7R0 232 aa9.17□□□□□ -0.94
SUPT16H-202ENST00000552829 OR6N2Q8NGY6 317 aa9.17□□□□□ -0.94
SUPT16H-202ENST00000552829 OR2T4Q8NH00 348 aa9.17□□□□□ -0.94
SUPT16H-202ENST00000552829 SPRYD4Q8WW59 207 aaPredicted RBP9.17□□□□□ -0.94
SUPT16H-202ENST00000552829 MND1Q9BWT6 205 aa9.17□□□□□ -0.94
SUPT16H-202ENST00000552829 NUAK2Q9H093 628 aa9.17□□□□□ -0.94
SUPT16H-202ENST00000552829 METTL8Q9H825 291 aaKnown RBP9.17□□□□□ -0.94
SUPT16H-202ENST00000552829 GAR1Q9NY12 217 aaKnown RBP9.17□□□□□ -0.94
SUPT16H-202ENST00000552829 VSX1Q9NZR4 365 aaPredicted RBP9.17□□□□□ -0.94
SUPT16H-202ENST00000552829 COPS3Q9UNS2 423 aa9.17□□□□□ -0.94
SUPT16H-202ENST00000552829 B9D1Q9UPM9 204 aa9.17□□□□□ -0.94
SUPT16H-202ENST00000552829 ERGIC3Q9Y282 383 aa9.17□□□□□ -0.94
SUPT16H-202ENST00000552829 LSM2Q9Y333 95 aaKnown RBP9.17□□□□□ -0.94
SUPT16H-202ENST00000552829 SF3B6Q9Y3B4 125 aaKnown RBP9.17□□□□□ -0.94
SUPT16H-202ENST00000552829 PNMA8CA0A1B0GUJ8 204 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 DAPL1A0PJW8 107 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 VGLL3A8MV65 326 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 J3QRE1 110 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 SLC16A7O60669 478 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 NOL3O60936 208 aaKnown RBP9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 ZFPL1O95159 310 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 IGHA1P01876 353 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 HLA-DQA2P01906 255 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 LIMS3P0CW19 117 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 LIMS4P0CW20 117 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 ZNF85Q03923 595 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 TMED1Q13445 227 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 CNPY1Q3B7I2 92 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 SYT6Q5T7P8 510 aaPredicted RBP9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 Q6ZS46 218 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 PGAP1Q75T13 922 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 SSX6Q7RTT6 188 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 SLC36A1Q7Z2H8 476 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 GLB1L2Q8IW92 636 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 OR6V1Q8N148 313 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 ZFP41Q8N8Y5 198 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 GJC3Q8NFK1 279 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 MUC7Q8TAX7 377 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 ISOC1Q96CN7 298 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 YIPF6Q96EC8 236 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 MAP6Q96JE9 813 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 OPALINQ96PE5 141 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 NKX3-1Q99801 234 aaPredicted RBP9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 ADAT1Q9BUB4 502 aaKnown RBP9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 ALG8Q9BVK2 526 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 FUNDC2Q9BWH2 189 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 ERVK13-1Q9NX77 482 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 NDUFA13Q9P0J0 144 aa9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 COA3Q9Y2R0 106 aaPredicted RBP9.16□□□□□ -0.94
SUPT16H-202ENST00000552829 hCG_2014768A0A024R1R8 64 aa9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 IGLV1-36A0A0B4J1U3 117 aa9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 A0A1W2PRX2 142 aa9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 NKX6-3A6NJ46 265 aa9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 ZNF670-ZNF695F2Z2N8 137 aa9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 MAGEB4O15481 346 aaPredicted RBP9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 NDUFB3O43676 98 aa9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 ANGPTL7O43827 346 aa9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 KHDRBS3O75525 346 aaKnown RBP9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 GRPP07492 148 aa9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 PF4V1P10720 104 aa9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 PSKH1P11801 424 aa9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 SELLP14151 372 aa9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 CD36P16671 472 aa9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 RPS27P42677 84 aaKnown RBP9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 WNT4P56705 351 aa9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 LSM3P62310 102 aaKnown RBP9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 CNN3Q15417 329 aaKnown RBP9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 SPHARQ15513 63 aa9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 MEP1BQ16820 701 aa9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 MICBQ29980 383 aa9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 ACBD7Q8N6N7 88 aa9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 C12orf43Q96C57 262 aaKnown RBP9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 SEH1LQ96EE3 360 aa9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 MGLLQ99685 303 aa9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 PRSS22Q9GZN4 317 aa9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 HAO2Q9NYQ3 351 aa9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 RSL24D1Q9UHA3 163 aaKnown RBP9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 ENPP5Q9UJA9 477 aa9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 KLHDC2Q9Y2U9 406 aa9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 LSM4Q9Y4Z0 139 aaKnown RBP9.15□□□□□ -0.94
SUPT16H-202ENST00000552829 STARD9Q9P2P6 4700 aa9.14□□□□□ -0.95
SUPT16H-202ENST00000552829 A0A1W2PQL4 384 aaPredicted RBP9.14□□□□□ -0.95
SUPT16H-202ENST00000552829 hCG_1807616A0A1W2PRN6 198 aa9.14□□□□□ -0.95
SUPT16H-202ENST00000552829 A6NDX4 124 aa9.14□□□□□ -0.95
SUPT16H-202ENST00000552829 A6NLC8 198 aa9.14□□□□□ -0.95
SUPT16H-202ENST00000552829 J3QLW9 94 aa9.14□□□□□ -0.95
SUPT16H-202ENST00000552829 PSMD9O00233 223 aa9.14□□□□□ -0.95
SUPT16H-202ENST00000552829 LALBAP00709 142 aa9.14□□□□□ -0.95
SUPT16H-202ENST00000552829 SPARCP09486 303 aa9.14□□□□□ -0.95
SUPT16H-202ENST00000552829 ZNF19P17023 458 aa9.14□□□□□ -0.95
SUPT16H-202ENST00000552829 ANOS1P23352 680 aa9.14□□□□□ -0.95
SUPT16H-202ENST00000552829 GADD45AP24522 165 aa9.14□□□□□ -0.95
SUPT16H-202ENST00000552829 CRABP1P29762 137 aa9.14□□□□□ -0.95
SUPT16H-202ENST00000552829 ACTC1P68032 377 aa9.14□□□□□ -0.95
SUPT16H-202ENST00000552829 ACTA1P68133 377 aa9.14□□□□□ -0.95
SUPT16H-202ENST00000552829 MALLQ13021 153 aa9.14□□□□□ -0.95
SUPT16H-202ENST00000552829 TP53I3Q53FA7 332 aa9.14□□□□□ -0.95
SUPT16H-202ENST00000552829 LRRC10Q5BKY1 277 aa9.14□□□□□ -0.95
SUPT16H-202ENST00000552829 RNLSQ5VYX0 342 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms