RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 MEX3AA1L020 520 aaKnown RBP14.07□□□□□ -0.16
CHMP1A-205ENST00000548650 METTL15A6NJ78 407 aa14.07□□□□□ -0.16
CHMP1A-205ENST00000548650 GATBO75879 557 aaKnown RBP14.07□□□□□ -0.16
CHMP1A-205ENST00000548650 SULT1C4O75897 302 aa14.07□□□□□ -0.16
CHMP1A-205ENST00000548650 RBP4P02753 201 aa14.07□□□□□ -0.16
CHMP1A-205ENST00000548650 LGALS4P56470 323 aa14.07□□□□□ -0.16
CHMP1A-205ENST00000548650 ISL1P61371 349 aa14.07□□□□□ -0.16
CHMP1A-205ENST00000548650 LDLRAD2Q5SZI1 272 aa14.07□□□□□ -0.16
CHMP1A-205ENST00000548650 OR8H2Q8N162 312 aa14.07□□□□□ -0.16
CHMP1A-205ENST00000548650 PRSS35Q8N3Z0 413 aa14.07□□□□□ -0.16
CHMP1A-205ENST00000548650 OR10H4Q8NGA5 316 aa14.07□□□□□ -0.16
CHMP1A-205ENST00000548650 SLAMF9Q96A28 289 aa14.07□□□□□ -0.16
CHMP1A-205ENST00000548650 FOXRED1Q96CU9 486 aaPredicted RBP14.07□□□□□ -0.16
CHMP1A-205ENST00000548650 SLC7A11Q9UPY5 501 aa14.07□□□□□ -0.16
CHMP1A-205ENST00000548650 TCF19Q9Y242 345 aa14.07□□□□□ -0.16
CHMP1A-205ENST00000548650 AP4S1Q9Y587 144 aa14.07□□□□□ -0.16
CHMP1A-205ENST00000548650 A0A0G2JK05 382 aa14.06□□□□□ -0.16
CHMP1A-205ENST00000548650 TMEM82A0PJX8 343 aa14.06□□□□□ -0.16
CHMP1A-205ENST00000548650 CHRM2P08172 466 aa14.06□□□□□ -0.16
CHMP1A-205ENST00000548650 ZNF728P0DKX0 622 aa14.06□□□□□ -0.16
CHMP1A-205ENST00000548650 FCGR1AP12314 374 aa14.06□□□□□ -0.16
CHMP1A-205ENST00000548650 KIR3DL2P43630 455 aa14.06□□□□□ -0.16
CHMP1A-205ENST00000548650 EDDM3BP56851 147 aa14.06□□□□□ -0.16
CHMP1A-205ENST00000548650 PLA1AQ53H76 456 aa14.06□□□□□ -0.16
CHMP1A-205ENST00000548650 ZNF626Q68DY1 528 aa14.06□□□□□ -0.16
CHMP1A-205ENST00000548650 SLC25A26Q70HW3 274 aa14.06□□□□□ -0.16
CHMP1A-205ENST00000548650 C11orf44Q8N8P7 122 aa14.06□□□□□ -0.16
CHMP1A-205ENST00000548650 RNF166Q96A37 237 aaPredicted RBP14.06□□□□□ -0.16
CHMP1A-205ENST00000548650 ZNF702PQ9H963 129 aa14.06□□□□□ -0.16
CHMP1A-205ENST00000548650 IL36RNQ9UBH0 155 aa14.06□□□□□ -0.16
CHMP1A-205ENST00000548650 OAZ3Q9UMX2 235 aa14.06□□□□□ -0.16
CHMP1A-205ENST00000548650 TBL2Q9Y4P3 447 aaKnown RBP14.06□□□□□ -0.16
CHMP1A-205ENST00000548650 ARG1P05089 322 aa14.05□□□□□ -0.16
CHMP1A-205ENST00000548650 UBCP0CG48 685 aaKnown RBP14.05□□□□□ -0.16
CHMP1A-205ENST00000548650 IGHV1-8P0DP01 117 aa14.05□□□□□ -0.16
CHMP1A-205ENST00000548650 FUT6P51993 359 aa14.05□□□□□ -0.16
CHMP1A-205ENST00000548650 ZNF85Q03923 595 aa14.05□□□□□ -0.16
CHMP1A-205ENST00000548650 C1orf146Q5VVC0 180 aa14.05□□□□□ -0.16
CHMP1A-205ENST00000548650 CCBE1Q6UXH8 406 aaPredicted RBP14.05□□□□□ -0.16
CHMP1A-205ENST00000548650 GDPD3Q7L5L3 318 aa14.05□□□□□ -0.16
CHMP1A-205ENST00000548650 CCDC54Q8NEL0 328 aa14.05□□□□□ -0.16
CHMP1A-205ENST00000548650 OR11H6Q8NGC7 330 aa14.05□□□□□ -0.16
CHMP1A-205ENST00000548650 OR8J1Q8NGP2 316 aa14.05□□□□□ -0.16
CHMP1A-205ENST00000548650 OR13D1Q8NGV5 346 aa14.05□□□□□ -0.16
CHMP1A-205ENST00000548650 EME1Q96AY2 570 aa14.05□□□□□ -0.16
CHMP1A-205ENST00000548650 RIBC2Q9H4K1 309 aa14.05□□□□□ -0.16
CHMP1A-205ENST00000548650 ZNF91Q05481 1191 aa14.04□□□□□ -0.16
CHMP1A-205ENST00000548650 TMED1Q13445 227 aa14.04□□□□□ -0.16
CHMP1A-205ENST00000548650 EDDM3AQ14507 147 aa14.04□□□□□ -0.16
CHMP1A-205ENST00000548650 HABP2Q14520 560 aaPredicted RBP14.04□□□□□ -0.16
CHMP1A-205ENST00000548650 CNN3Q15417 329 aaKnown RBP14.04□□□□□ -0.16
CHMP1A-205ENST00000548650 TP53I3Q53FA7 332 aa14.04□□□□□ -0.16
CHMP1A-205ENST00000548650 FAM220AQ7Z4H9 259 aa14.04□□□□□ -0.16
CHMP1A-205ENST00000548650 Q8N2B8 174 aa14.04□□□□□ -0.16
CHMP1A-205ENST00000548650 EMG1Q92979 244 aaKnown RBP14.04□□□□□ -0.16
CHMP1A-205ENST00000548650 C10orf35Q96D05 121 aa14.04□□□□□ -0.16
CHMP1A-205ENST00000548650 BORCS8Q96FH0 119 aa14.04□□□□□ -0.16
CHMP1A-205ENST00000548650 ZNF714Q96N38 554 aa14.04□□□□□ -0.16
CHMP1A-205ENST00000548650 NKX3-1Q99801 234 aaPredicted RBP14.04□□□□□ -0.16
CHMP1A-205ENST00000548650 SERTAD4Q9NUC0 356 aa14.04□□□□□ -0.16
CHMP1A-205ENST00000548650 RBFOX1Q9NWB1 397 aaKnown RBP14.04□□□□□ -0.16
CHMP1A-205ENST00000548650 GNG8Q9UK08 70 aa14.04□□□□□ -0.16
CHMP1A-205ENST00000548650 IGKV1-9A0A0C4DH69 117 aa14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 A6NDX4 124 aa14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 INMTO95050 263 aa14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 HAND1O96004 215 aa14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 IGHA1P01876 353 aa14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 OPN1MWP04001 364 aa14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 OPN1MW2P0DN77 364 aa14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 OPN1MW3P0DN78 364 aa14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 VSIG10L2P0DP72 767 aa14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 RAB13P51153 203 aa14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 MEF2CQ06413 473 aaPredicted RBP14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 FAM189A2Q15884 450 aa14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 SSX2Q16385 188 aa14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 TMEM219Q86XT9 240 aa14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 EGFL6Q8IUX8 553 aa14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 RDH10Q8IZV5 341 aa14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 TPRX1Q8N7U7 411 aa14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 OR52N4Q8NGI2 321 aa14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 RPS4Y2Q8TD47 263 aa14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 PP6455Q8WZ26 134 aa14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 ADAT3Q96EY9 351 aaPredicted RBP14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 CENPNQ96H22 339 aaPredicted RBP14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 SNX22Q96L94 193 aa14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 OSBPL10Q9BXB5 764 aa14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 CDCA4Q9BXL8 241 aa14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 SEBOXQ9HB31 216 aaPredicted RBP14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 LINC00312Q9Y6C7 94 aa14.03□□□□□ -0.16
CHMP1A-205ENST00000548650 NOTCH3Q9UM47 2321 aa14.02□□□□□ -0.16
CHMP1A-205ENST00000548650 TRBV2A0A0J9YWF9 115 aa14.02□□□□□ -0.17
CHMP1A-205ENST00000548650 SAC3D1A6NKF1 404 aa14.02□□□□□ -0.17
CHMP1A-205ENST00000548650 G3V4G9 280 aa14.02□□□□□ -0.17
CHMP1A-205ENST00000548650 PSPNO60542 156 aa14.02□□□□□ -0.17
CHMP1A-205ENST00000548650 ATP6V1E1P36543 226 aa14.02□□□□□ -0.17
CHMP1A-205ENST00000548650 NPBWR2P48146 333 aa14.02□□□□□ -0.17
CHMP1A-205ENST00000548650 DYNLT3P51808 116 aa14.02□□□□□ -0.17
CHMP1A-205ENST00000548650 BEAN1Q3B7T3 259 aa14.02□□□□□ -0.17
CHMP1A-205ENST00000548650 Q8IYB0 196 aa14.02□□□□□ -0.17
CHMP1A-205ENST00000548650 DNAAF1Q8NEP3 725 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms