RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	GATC	O43716	136 aa	Known RBP	1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	KDELR3	O43731	214 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	GMDS	O60547	372 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	DHRS3	O75911	302 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	MB	P02144	154 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	CDK1	P06493	297 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	HOXB8	P17481	243 aa	Predicted RBP	1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	HTR2B	P41595	481 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	NUDT2	P50583	147 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	IL5RA	Q01344	420 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	IFFO1	Q0D2I5	559 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	NDUFAF6	Q330K2	333 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	PYDC2	Q56P42	97 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	CLLU1OS	Q5K130	101 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	C16orf87	Q6PH81	154 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	SMARCD3	Q6STE5	483 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	PAGE2	Q7Z2X7	111 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	CYP4Z2P	Q8N1L4	340 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	OR4A15	Q8NGL6	344 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	ACTL9	Q8TC94	416 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	FAM131C	Q96AQ9	280 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	OTUB2	Q96DC9	234 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	METTL26	Q96S19	204 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	BCL7B	Q9BQE9	202 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	SHCBP1L	Q9BZQ2	653 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	ABCG5	Q9H222	651 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	PORCN	Q9H237	461 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	DSN1	Q9H410	356 aa		1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	RBM22	Q9NW64	420 aa	Known RBP eCLIP	1.84	□□□□□ -2.11
RAP1B-231	ENST00000544639	DHX57	Q6P158	1386 aa	Known RBP	1.84	□□□□□ -2.12
RAP1B-231	ENST00000544639	MIA3	Q5JRA6	1907 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	AQR	O60306	1485 aa	Known RBP eCLIP	1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	TRAV8-7	A0A075B6U6	113 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	ANKRD20A5P	A0PJZ0	165 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	GMNC	A6NCL1	334 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	CPSF4	O95639	269 aa	Known RBP	1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	CRYGC	P07315	174 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	SLC18A1	P54219	525 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	TNFRSF9	Q07011	255 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	DYNC1I2	Q13409	638 aa	Known RBP	1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	ENDOG	Q14249	297 aa	Known RBP	1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	WDR43	Q15061	677 aa	Known RBP eCLIP	1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	ZNF141	Q15928	474 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	TAL2	Q16559	108 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	KRTAP25-1	Q3LHN0	102 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	ZNF404	Q494X3	552 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	NKAIN1	Q4KMZ8	207 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	HSP90AA4P	Q58FG1	418 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	IDNK	Q5T6J7	187 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	SYT6	Q5T7P8	510 aa	Predicted RBP	1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	CA13	Q8N1Q1	262 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	CCNYL1	Q8N7R7	359 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	LY6G5B	Q8NDX9	201 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	OR8A1	Q8NGG7	326 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	CMTM2	Q8TAZ6	248 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	UBA3	Q8TBC4	463 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	FXYD5	Q96DB9	178 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	RILP	Q96NA2	401 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	SLC38A1	Q9H2H9	487 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	PARP11	Q9NR21	331 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	TAC3	Q9UHF0	121 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	AP3M1	Q9Y2T2	418 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	INSIG2	Q9Y5U4	225 aa		1.83	□□□□□ -2.12
RAP1B-231	ENST00000544639	NACAD	O15069	1562 aa		1.82	□□□□□ -2.12
RAP1B-231	ENST00000544639	PLXNB3	Q9ULL4	1909 aa		1.82	□□□□□ -2.12
RAP1B-231	ENST00000544639		K7EPK0	472 aa		1.82	□□□□□ -2.12
RAP1B-231	ENST00000544639	ZNF593	O00488	134 aa	Predicted RBP	1.82	□□□□□ -2.12
RAP1B-231	ENST00000544639	TCAP	O15273	167 aa		1.82	□□□□□ -2.12
RAP1B-231	ENST00000544639	SLC37A4	O43826	429 aa		1.82	□□□□□ -2.12
RAP1B-231	ENST00000544639	RHOC	P08134	193 aa		1.82	□□□□□ -2.12
RAP1B-231	ENST00000544639	CPN2	P22792	545 aa		1.82	□□□□□ -2.12
RAP1B-231	ENST00000544639	FOXA1	P55317	472 aa		1.82	□□□□□ -2.12
RAP1B-231	ENST00000544639	NELFCD	Q8IXH7	590 aa		1.82	□□□□□ -2.12
RAP1B-231	ENST00000544639	OR8S1	Q8NH09	359 aa		1.82	□□□□□ -2.12
RAP1B-231	ENST00000544639	IGF2BP2-AS1	Q96M15	143 aa		1.82	□□□□□ -2.12
RAP1B-231	ENST00000544639	OR2M4	Q96R27	311 aa		1.82	□□□□□ -2.12
RAP1B-231	ENST00000544639	SRR	Q9GZT4	340 aa		1.82	□□□□□ -2.12
RAP1B-231	ENST00000544639	GAL3ST2	Q9H3Q3	398 aa		1.82	□□□□□ -2.12
RAP1B-231	ENST00000544639	C12orf4	Q9NQ89	552 aa		1.82	□□□□□ -2.12
RAP1B-231	ENST00000544639	ZNF780B	Q9Y6R6	833 aa		1.82	□□□□□ -2.12
RAP1B-231	ENST00000544639	HMCN1	Q96RW7	5635 aa		1.82	□□□□□ -2.12
RAP1B-231	ENST00000544639		A0A0J9YYE9	177 aa		1.81	□□□□□ -2.12
RAP1B-231	ENST00000544639	TRBC1	P01850	177 aa		1.81	□□□□□ -2.12
RAP1B-231	ENST00000544639	LIPC	P11150	499 aa		1.81	□□□□□ -2.12
RAP1B-231	ENST00000544639	PTHLH	P12272	177 aa		1.81	□□□□□ -2.12
RAP1B-231	ENST00000544639	TGFBR2	P37173	567 aa		1.81	□□□□□ -2.12
RAP1B-231	ENST00000544639	KRTAP12-4	P60329	112 aa		1.81	□□□□□ -2.12
RAP1B-231	ENST00000544639	SSX1	Q16384	188 aa		1.81	□□□□□ -2.12
RAP1B-231	ENST00000544639	KRTAP21-2	Q3LI59	83 aa		1.81	□□□□□ -2.12
RAP1B-231	ENST00000544639	ATP6AP1L	Q52LC2	224 aa		1.81	□□□□□ -2.12
RAP1B-231	ENST00000544639	COMTD1	Q86VU5	262 aa		1.81	□□□□□ -2.12
RAP1B-231	ENST00000544639	RPRML	Q8N4K4	120 aa		1.81	□□□□□ -2.12
RAP1B-231	ENST00000544639	QKI	Q96PU8	341 aa	Known RBP eCLIP	1.81	□□□□□ -2.12	5e-8	■■■■■ 29.9
RAP1B-231	ENST00000544639	MAP1LC3C	Q9BXW4	147 aa		1.81	□□□□□ -2.12
RAP1B-231	ENST00000544639	TSGA10	Q9BZW7	698 aa		1.81	□□□□□ -2.12
RAP1B-231	ENST00000544639	WDR55	Q9H6Y2	383 aa	Predicted RBP	1.81	□□□□□ -2.12
RAP1B-231	ENST00000544639	ANXA10	Q9UJ72	324 aa		1.81	□□□□□ -2.12
RAP1B-231	ENST00000544639	FLVCR2	Q9UPI3	526 aa		1.81	□□□□□ -2.12
RAP1B-231	ENST00000544639	TRAPPC1	Q9Y5R8	145 aa		1.81	□□□□□ -2.12
RAP1B-231	ENST00000544639	ICOS	Q9Y6W8	199 aa		1.81	□□□□□ -2.12

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms