RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 SLC22A6Q4U2R8 563 aa12.1□□□□□ -0.47
TNFRSF1A-216ENST00000543995 STUMQ69YW2 141 aa12.1□□□□□ -0.47
TNFRSF1A-216ENST00000543995 GLIPR1L1Q6UWM5 242 aa12.1□□□□□ -0.47
TNFRSF1A-216ENST00000543995 OR8B3Q8NGG8 313 aa12.1□□□□□ -0.47
TNFRSF1A-216ENST00000543995 OR10K1Q8NGX5 313 aa12.1□□□□□ -0.47
TNFRSF1A-216ENST00000543995 NEIL1Q96FI4 390 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF1A-216ENST00000543995 OR8B2Q96RD0 313 aa12.1□□□□□ -0.47
TNFRSF1A-216ENST00000543995 CCL13Q99616 98 aa12.1□□□□□ -0.47
TNFRSF1A-216ENST00000543995 PATZ1Q9HBE1 687 aaKnown RBP12.1□□□□□ -0.47
TNFRSF1A-216ENST00000543995 RHOFQ9HBH0 211 aa12.1□□□□□ -0.47
TNFRSF1A-216ENST00000543995 V9GY05 133 aa12.1□□□□□ -0.47
TNFRSF1A-216ENST00000543995 NKX6-3A6NJ46 265 aa12.09□□□□□ -0.47
TNFRSF1A-216ENST00000543995 RFPL4AA6NLU0 287 aa12.09□□□□□ -0.47
TNFRSF1A-216ENST00000543995 RFPL4AL1F8VTS6 287 aa12.09□□□□□ -0.47
TNFRSF1A-216ENST00000543995 ZNF780AO75290 641 aaPredicted RBP12.09□□□□□ -0.47
TNFRSF1A-216ENST00000543995 KNG1P01042 644 aa12.09□□□□□ -0.47
TNFRSF1A-216ENST00000543995 PSG2P11465 335 aa12.09□□□□□ -0.47
TNFRSF1A-216ENST00000543995 HTR2CP28335 458 aa12.09□□□□□ -0.47
TNFRSF1A-216ENST00000543995 MTNR1BP49286 362 aa12.09□□□□□ -0.47
TNFRSF1A-216ENST00000543995 OR10A3P58181 314 aa12.09□□□□□ -0.47
TNFRSF1A-216ENST00000543995 LMO4P61968 165 aa12.09□□□□□ -0.47
TNFRSF1A-216ENST00000543995 GPR107Q5VW38 600 aa12.09□□□□□ -0.47
TNFRSF1A-216ENST00000543995 SLC36A1Q7Z2H8 476 aa12.09□□□□□ -0.47
TNFRSF1A-216ENST00000543995 ANGPTL6Q8NI99 470 aa12.09□□□□□ -0.47
TNFRSF1A-216ENST00000543995 C18orf12Q96KH6 178 aa12.09□□□□□ -0.47
TNFRSF1A-216ENST00000543995 COX4I2Q96KJ9 171 aa12.09□□□□□ -0.47
TNFRSF1A-216ENST00000543995 GFI1Q99684 422 aa12.09□□□□□ -0.47
TNFRSF1A-216ENST00000543995 HMG20AQ9NP66 347 aa12.09□□□□□ -0.47
TNFRSF1A-216ENST00000543995 PCDHB16Q9NRJ7 776 aa12.09□□□□□ -0.47
TNFRSF1A-216ENST00000543995 YLPM1P49750 1951 aaKnown RBP12.08□□□□□ -0.47
TNFRSF1A-216ENST00000543995 IGKV1D-17A0A075B6S4 117 aa12.08□□□□□ -0.48
TNFRSF1A-216ENST00000543995 SMIM30A4D0T7 59 aa12.08□□□□□ -0.48
TNFRSF1A-216ENST00000543995 TFF1P04155 84 aa12.08□□□□□ -0.48
TNFRSF1A-216ENST00000543995 WNT2P09544 360 aa12.08□□□□□ -0.48
TNFRSF1A-216ENST00000543995 CEBPDP49716 269 aaPredicted RBP12.08□□□□□ -0.48
TNFRSF1A-216ENST00000543995 BMXP51813 675 aa12.08□□□□□ -0.48
TNFRSF1A-216ENST00000543995 MXD1Q05195 221 aa12.08□□□□□ -0.48
TNFRSF1A-216ENST00000543995 GPR176Q14439 515 aa12.08□□□□□ -0.48
TNFRSF1A-216ENST00000543995 TMEM249Q2WGJ8 235 aa12.08□□□□□ -0.48
TNFRSF1A-216ENST00000543995 ESCO2Q56NI9 601 aa12.08□□□□□ -0.48
TNFRSF1A-216ENST00000543995 C1orf100Q5SVJ3 147 aa12.08□□□□□ -0.48
TNFRSF1A-216ENST00000543995 ASCL4Q6XD76 172 aa12.08□□□□□ -0.48
TNFRSF1A-216ENST00000543995 TPRA1Q86W33 373 aa12.08□□□□□ -0.48
TNFRSF1A-216ENST00000543995 LYPD6Q86Y78 171 aa12.08□□□□□ -0.48
TNFRSF1A-216ENST00000543995 OR6M1Q8NGM8 313 aa12.08□□□□□ -0.48
TNFRSF1A-216ENST00000543995 DNTTIP1Q9H147 329 aa12.08□□□□□ -0.48
TNFRSF1A-216ENST00000543995 IL36RNQ9UBH0 155 aa12.08□□□□□ -0.48
TNFRSF1A-216ENST00000543995 GLS2Q9UI32 602 aa12.08□□□□□ -0.48
TNFRSF1A-216ENST00000543995 FAM157AC9JC47 383 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 TNFRSF13BO14836 293 aaPredicted RBP12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 INHBBP09529 407 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 DUSP1P28562 367 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 PRDX2P32119 198 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 SDC2P34741 201 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 TGFBR1P36897 503 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 FGF12P61328 243 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 SEC61A1P61619 476 aaKnown RBP12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 GNB2P62879 340 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 IL13RA1P78552 427 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 IKZF1Q13422 519 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 RAB11BQ15907 218 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 SPIN3Q5JUX0 258 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 HES5Q5TA89 166 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 ELP2Q6IA86 826 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 ANKRD13BQ86YJ7 626 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 CD177Q8N6Q3 437 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 FAM216BQ8N7L0 139 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 TBC1D15Q8TC07 691 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 MED30Q96HR3 178 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 TMUB1Q9BVT8 246 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 SSBP3Q9BWW4 388 aaPredicted RBP12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 IL36GQ9NZH8 169 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 CTSZQ9UBR2 303 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 GHRLQ9UBU3 117 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 CLN8Q9UBY8 286 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 CREBBPQ92793 2442 aa12.07□□□□□ -0.48
TNFRSF1A-216ENST00000543995 A0A1B0GW55 424 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 F5H0A9 414 aaPredicted RBP12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 SLC17A2O00624 439 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 SLC22A1O15245 554 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 NDUFB3O43676 98 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 HAND1O96004 215 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 UBBP0CG47 229 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 DUX4L2P0CJ85 424 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 DUX4L3P0CJ86 424 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 DUX4L4P0CJ87 422 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 DUX4L5P0CJ88 424 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 DUX4L6P0CJ89 424 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 DUX4L7P0CJ90 424 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 GTF2F2P13984 249 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 AMY2BP19961 511 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 CPT2P23786 658 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 PITPNBP48739 271 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 GZMKP49863 264 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 SCN1BQ07699 218 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 P2RY14Q15391 338 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 DGUOKQ16854 277 aa12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 ATPAF1Q5TC12 328 aaPredicted RBP12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 DUX4L9Q6RFH8 374 aaPredicted RBP12.06□□□□□ -0.48
TNFRSF1A-216ENST00000543995 ZNF788Q6ZQV5 615 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms