RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 HEXAP06865 529 aa7.57□□□□□ -1.2
ABCB1-210ENST00000543898 SNCAP37840 140 aa7.57□□□□□ -1.2
ABCB1-210ENST00000543898 CSNK1EP49674 416 aaKnown RBP7.57□□□□□ -1.2
ABCB1-210ENST00000543898 MALLQ13021 153 aa7.57□□□□□ -1.2
ABCB1-210ENST00000543898 PLAC9Q5JTB6 97 aa7.57□□□□□ -1.2
ABCB1-210ENST00000543898 RAET1LQ5VY80 246 aa7.57□□□□□ -1.2
ABCB1-210ENST00000543898 THNSL2Q86YJ6 484 aa7.57□□□□□ -1.2
ABCB1-210ENST00000543898 PTPMT1Q8WUK0 201 aaPredicted RBP7.57□□□□□ -1.2
ABCB1-210ENST00000543898 TREM2Q9NZC2 230 aa7.57□□□□□ -1.2
ABCB1-210ENST00000543898 KLF2Q9Y5W3 355 aaPredicted RBP7.57□□□□□ -1.2
ABCB1-210ENST00000543898 DENND4CQ5VZ89 1909 aa7.57□□□□□ -1.2
ABCB1-210ENST00000543898 H0YL77 283 aa7.57□□□□□ -1.2
ABCB1-210ENST00000543898 HLA-GP17693 338 aa7.57□□□□□ -1.2
ABCB1-210ENST00000543898 FOXF1Q12946 379 aa7.57□□□□□ -1.2
ABCB1-210ENST00000543898 FDX2Q6P4F2 183 aa7.57□□□□□ -1.2
ABCB1-210ENST00000543898 GPR137CQ8N3F9 429 aa7.57□□□□□ -1.2
ABCB1-210ENST00000543898 POC1AQ8NBT0 407 aa7.57□□□□□ -1.2
ABCB1-210ENST00000543898 CCDC187A0A096LP49 1063 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 A0A0U1RQK1 487 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 SERPINE3A8MV23 424 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 SERPINE2P07093 398 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 PTGER4P35408 488 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 DMRTC2Q8IXT2 367 aaPredicted RBP7.56□□□□□ -1.2
ABCB1-210ENST00000543898 PAQR4Q8N4S7 273 aaPredicted RBP7.56□□□□□ -1.2
ABCB1-210ENST00000543898 SPTSSAQ969W0 71 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 RAB39BQ96DA2 213 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 FAM210BQ96KR6 192 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 SGCZQ96LD1 299 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 PECRQ9BY49 303 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 TMEM100Q9NV29 134 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 STARD10Q9Y365 291 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 ALG1L2C9J202 215 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 FAM3AP98173 230 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 SSPNQ14714 243 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 MST1LQ2TV78 715 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 VAX1Q5SQQ9 334 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 LANCL3Q6ZV70 420 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 OR5C1Q8NGR4 320 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 RNF133Q8WVZ7 376 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 IL1F10Q8WWZ1 152 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 DYRK2Q92630 601 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 DMRT1Q9Y5R6 373 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 TRBV11-1A0A0K0K1C0 115 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 C20orf202A1L168 122 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 OR8U8P0C7N1 319 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 DDTP30046 118 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 EFNA3P52797 238 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 SURF2Q15527 256 aaPredicted RBP7.56□□□□□ -1.2
ABCB1-210ENST00000543898 UBE2V2Q15819 145 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 RTL6Q6ICC9 239 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 BTNL8Q6UX41 500 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 TMEM230Q96A57 120 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 DEFB126Q9BYW3 111 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 RTN4RQ9BZR6 473 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 SRPK3Q9UPE1 567 aa7.56□□□□□ -1.2
ABCB1-210ENST00000543898 TGIF2-C20orf24A0A0A6YYL0 155 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 IGHV5-51A0A0C4DH38 117 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 G3V3Y1 287 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 HSD17B6O14756 317 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 GEMIN2O14893 280 aaKnown RBP7.55□□□□□ -1.2
ABCB1-210ENST00000543898 DEDDO75618 318 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 OR2J2O76002 312 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 HBE1P02100 147 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 MBPP02686 304 aaPredicted RBP7.55□□□□□ -1.2
ABCB1-210ENST00000543898 FCGR3AP08637 254 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 SEC11BP0C7V7 166 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 STAG3L3P0CL85 134 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 HOXC12P31275 282 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 ECI1P42126 302 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 ELLP55199 621 aaPredicted RBP7.55□□□□□ -1.2
ABCB1-210ENST00000543898 GAMTQ14353 236 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 RNF144BQ7Z419 303 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 REC114Q7Z4M0 266 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 RTBDNQ9BSG5 229 aaPredicted RBP7.55□□□□□ -1.2
ABCB1-210ENST00000543898 KCNS2Q9ULS6 477 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 ESPL1Q14674 2120 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 IGKV1D-43A0A0B4J1Z2 117 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 IFNA1P01562 189 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 TK1P04183 234 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 IGFBP3P17936 291 aaPredicted RBP7.55□□□□□ -1.2
ABCB1-210ENST00000543898 TNFRSF4P43489 277 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 RSPO4Q2I0M5 234 aaPredicted RBP7.55□□□□□ -1.2
ABCB1-210ENST00000543898 OR2C3Q8N628 320 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 ASB10Q8WXI3 467 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 SLC39A7Q92504 469 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 MMACHCQ9Y4U1 282 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 CACNA1DQ01668 2161 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 ANKUB1A6NFN9 424 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 H3BMH7 237 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 K7EQS6 105 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 ZNF217O75362 1048 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 DXOO77932 396 aaKnown RBP7.55□□□□□ -1.2
ABCB1-210ENST00000543898 APOBEC1P41238 236 aaKnown RBP7.55□□□□□ -1.2
ABCB1-210ENST00000543898 CDX1P47902 265 aaPredicted RBP7.55□□□□□ -1.2
ABCB1-210ENST00000543898 FOXK1P85037 733 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 DLX2Q07687 328 aaPredicted RBP7.55□□□□□ -1.2
ABCB1-210ENST00000543898 CYB561D1Q8N8Q1 229 aa7.55□□□□□ -1.2
ABCB1-210ENST00000543898 RBMXL1Q96E39 390 aaKnown RBP7.55□□□□□ -1.2
ABCB1-210ENST00000543898 PACRGQ96M98 296 aaPredicted RBP7.55□□□□□ -1.2
ABCB1-210ENST00000543898 HIST1H2AAQ96QV6 131 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms