RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 CHCHD6Q9BRQ6 235 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 SSBP3Q9BWW4 388 aaPredicted RBP5.28□□□□□ -1.56
LTBR-212ENST00000543542 OR51E2Q9H255 320 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 RBFOX1Q9NWB1 397 aaKnown RBP5.28□□□□□ -1.56
LTBR-212ENST00000543542 KCNS2Q9ULS6 477 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 MRPS28Q9Y2Q9 187 aaKnown RBP5.28□□□□□ -1.56
LTBR-212ENST00000543542 SF3B6Q9Y3B4 125 aaKnown RBP5.28□□□□□ -1.56
LTBR-212ENST00000543542 AK6Q9Y3D8 172 aaKnown RBP5.28□□□□□ -1.56
LTBR-212ENST00000543542 NAV2Q8IVL1 2488 aa5.28□□□□□ -1.56
LTBR-212ENST00000543542 CELSR1Q9NYQ6 3014 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 A0A1W2PQ09 198 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 F8VVB4 439 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 F8VWA3 439 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.27□□□□□ -1.57
LTBR-212ENST00000543542 SIRPB1O00241 398 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 DVL1O14640 695 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 PHF1O43189 567 aaPredicted RBP5.27□□□□□ -1.57
LTBR-212ENST00000543542 CD5LO43866 347 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 AIREO43918 545 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 ZNF780AO75290 641 aaPredicted RBP5.27□□□□□ -1.57
LTBR-212ENST00000543542 CRTAPO75718 401 aaPredicted RBP5.27□□□□□ -1.57
LTBR-212ENST00000543542 SC5DO75845 299 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 KDM4BO94953 1096 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 FSTL3O95633 263 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 LY6G6DO95868 133 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 HAND1O96004 215 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 KNG1P01042 644 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 MSMBP08118 114 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 CHRM2P08172 466 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 ACAA1P09110 424 aaPredicted RBP5.27□□□□□ -1.57
LTBR-212ENST00000543542 WNT2P09544 360 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 ZNF44P15621 663 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 RAB3BP20337 219 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 GALP22466 123 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 CPT2P23786 658 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 GABRR1P24046 479 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 GADD45AP24522 165 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 HTR2CP28335 458 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 DUSP1P28562 367 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 PRDX2P32119 198 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 RANBP1P43487 201 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 MTNR1BP49286 362 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 CEBPDP49716 269 aaPredicted RBP5.27□□□□□ -1.57
LTBR-212ENST00000543542 PSMD7P51665 324 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 ZP1P60852 638 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 SEC61A1P61619 476 aaKnown RBP5.27□□□□□ -1.57
LTBR-212ENST00000543542 LSM3P62310 102 aaKnown RBP5.27□□□□□ -1.57
LTBR-212ENST00000543542 GPR176Q14439 515 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 RAB11BQ15907 218 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 SLC22A6Q4U2R8 563 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 SPIN3Q5JUX0 258 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 DCAF12L2Q5VW00 463 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 CD276Q5ZPR3 534 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 STUMQ69YW2 141 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 ASPHD2Q6ICH7 369 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 ZNF529Q6P280 563 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 FAHD2BQ6P2I3 314 aaPredicted RBP5.27□□□□□ -1.57
LTBR-212ENST00000543542 BTNL3Q6UXE8 466 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 Q71RC1 249 aaPredicted RBP5.27□□□□□ -1.57
LTBR-212ENST00000543542 GPR141Q7Z602 305 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 CDH26Q8IXH8 852 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 OSR2Q8N2R0 312 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 FAM216BQ8N7L0 139 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 PXT1Q8NFP0 134 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 ANGPTL6Q8NI99 470 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 PPP1R35Q8TAP8 253 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 MSI2Q96DH6 328 aaKnown RBP5.27□□□□□ -1.57
LTBR-212ENST00000543542 FAHD2AQ96GK7 314 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 KCTD7Q96MP8 289 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 GAFA1Q96PS6 74 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 UQCC2Q9BRT2 126 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 CST11Q9H112 138 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 DNTTIP1Q9H147 329 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 GSX1Q9H4S2 264 aaPredicted RBP5.27□□□□□ -1.57
LTBR-212ENST00000543542 CNTD2Q9H8S5 307 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 RHOFQ9HBH0 211 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 HMG20AQ9NP66 347 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 HIF1ANQ9NWT6 349 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 TXNL4BQ9NX01 149 aaKnown RBP5.27□□□□□ -1.57
LTBR-212ENST00000543542 SLC25A10Q9UBX3 287 aaPredicted RBP5.27□□□□□ -1.57
LTBR-212ENST00000543542 SCOCQ9UIL1 159 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 V9GY05 133 aa5.27□□□□□ -1.57
LTBR-212ENST00000543542 IGKV1D-17A0A075B6S4 117 aa5.26□□□□□ -1.57
LTBR-212ENST00000543542 LOC105371242A0A075B767 164 aa5.26□□□□□ -1.57
LTBR-212ENST00000543542 A0A096LNT2 108 aa5.26□□□□□ -1.57
LTBR-212ENST00000543542 TRAV1-2A0A0B4J238 106 aa5.26□□□□□ -1.57
LTBR-212ENST00000543542 TRAV20A0A0B4J274 112 aa5.26□□□□□ -1.57
LTBR-212ENST00000543542 IGKV1-12A0A0C4DH73 117 aa5.26□□□□□ -1.57
LTBR-212ENST00000543542 A0A0G2JMP0 313 aa5.26□□□□□ -1.57
LTBR-212ENST00000543542 A0A0X1KG70 313 aa5.26□□□□□ -1.57
LTBR-212ENST00000543542 A0A1B0GW55 424 aa5.26□□□□□ -1.57
LTBR-212ENST00000543542 SMIM30A4D0T7 59 aa5.26□□□□□ -1.57
LTBR-212ENST00000543542 A8MV72 311 aaPredicted RBP5.26□□□□□ -1.57
LTBR-212ENST00000543542 F5H0A9 414 aaPredicted RBP5.26□□□□□ -1.57
LTBR-212ENST00000543542 DEGS1O15121 323 aa5.26□□□□□ -1.57
LTBR-212ENST00000543542 SIGLEC5O15389 551 aa5.26□□□□□ -1.57
LTBR-212ENST00000543542 NOL3O60936 208 aaKnown RBP5.26□□□□□ -1.57
LTBR-212ENST00000543542 OR7C1O76099 320 aaPredicted RBP5.26□□□□□ -1.57
LTBR-212ENST00000543542 MPIG6BO95866 241 aa5.26□□□□□ -1.57
LTBR-212ENST00000543542 IGKV1D-12P01611 117 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms