RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 MEGF9Q9H1U4 602 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 ZNF442Q9H7R0 627 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 ADGRL4Q9HBW9 690 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 PNRC2Q9NPJ4 139 aaKnown RBP4.34□□□□□ -1.71
CLIP1-217ENST00000543205 PEF1Q9UBV8 284 aaKnown RBP4.34□□□□□ -1.71
CLIP1-217ENST00000543205 FOXJ3Q9UPW0 622 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 LAMP3Q9UQV4 416 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 RHBDD3Q9Y3P4 386 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 RPL36Q9Y3U8 105 aaKnown RBP4.34□□□□□ -1.71
CLIP1-217ENST00000543205 PCDHGB1Q9Y5G3 927 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 HSPE1-MOB4S4R3N1 261 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 PRSS46E5RG02 174 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 M0R135 149 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 XRCC3O43542 346 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 APOC1P02654 83 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 RAF1P04049 648 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 CSN3P07498 182 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 OR4A8P0C604 315 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 OR2T7P0C7T2 308 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 SRD5A1P18405 259 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 ALOX5APP20292 161 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 GLRXP35754 106 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 CXCR4P61073 352 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 PPP1CBP62140 327 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 RPL23AP62750 156 aaKnown RBP4.34□□□□□ -1.71
CLIP1-217ENST00000543205 BDH1Q02338 343 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 MAD2L1BPQ15013 274 aaPredicted RBP4.34□□□□□ -1.71
CLIP1-217ENST00000543205 SNCBQ16143 134 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 PAMR1Q6UXH9 720 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 RHOUQ7L0Q8 258 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 ZNF101Q8IZC7 436 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 ZNF283Q8N7M2 679 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 OR10H4Q8NGA5 316 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 OR2T27Q8NH04 317 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 CNIH3Q8TBE1 160 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 RNF133Q8WVZ7 376 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 PIGTQ969N2 578 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 APOBEC3DQ96AK3 386 aaPredicted RBP4.34□□□□□ -1.71
CLIP1-217ENST00000543205 ZNF799Q96GE5 643 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 TBX5Q99593 518 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 FAM110AQ9BQ89 295 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 PCGF1Q9BSM1 259 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 MROQ9BYG7 248 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 LIME1Q9H400 295 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 SP140LQ9H930 580 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 CBLN4Q9NTU7 201 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 DDX28Q9NUL7 540 aaKnown RBP4.34□□□□□ -1.71
CLIP1-217ENST00000543205 HIF1ANQ9NWT6 349 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 ST6GALNAC2Q9UJ37 374 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 IKZF2Q9UKS7 526 aa4.34□□□□□ -1.71
CLIP1-217ENST00000543205 HIVEP1P15822 2718 aa4.34□□□□□ -1.72
CLIP1-217ENST00000543205 ADGRG4Q8IZF6 3080 aa4.34□□□□□ -1.72
CLIP1-217ENST00000543205 TRAV25A0A0B4J276 109 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 A0A1W2PQL4 384 aaPredicted RBP4.33□□□□□ -1.72
CLIP1-217ENST00000543205 DAPL1A0PJW8 107 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 IRGMA1A4Y4 181 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 FADS2O95864 444 aaKnown RBP4.33□□□□□ -1.72
CLIP1-217ENST00000543205 NGFP01138 241 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 SOD3P08294 240 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 ADH4P08319 380 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 GNAO1P09471 354 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 ACSM4P0C7M7 580 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 STAG3L2P0CL84 134 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 DBTP11182 482 aaKnown RBP4.33□□□□□ -1.72
CLIP1-217ENST00000543205 DUSP1P28562 367 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 OPRL1P41146 370 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 PTGFRP43088 359 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 CX3CR1P49238 355 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 PRKXP51817 358 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 ISL1P61371 349 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 ERVS71-1P61550 626 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 SNRPD2P62316 118 aaKnown RBP4.33□□□□□ -1.72
CLIP1-217ENST00000543205 ACTC1P68032 377 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 ACTA1P68133 377 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 DLK1P80370 383 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 ZNF91Q05481 1191 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 DYRK1AQ13627 763 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 MOGQ16653 247 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 RSPO1Q2MKA7 263 aaPredicted RBP4.33□□□□□ -1.72
CLIP1-217ENST00000543205 KRTAP27-1Q3LI81 207 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 ZNF718Q3SXZ3 478 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 KLHL22Q53GT1 634 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 ZNF322Q6U7Q0 402 aaPredicted RBP4.33□□□□□ -1.72
CLIP1-217ENST00000543205 DRAM2Q6UX65 266 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 LRRN1Q6UXK5 716 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 SYNPRQ8TBG9 265 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 SLC25A40Q8TBP6 338 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 APH1BQ8WW43 257 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 MRPL24Q96A35 216 aaKnown RBP4.33□□□□□ -1.72
CLIP1-217ENST00000543205 LGALS12Q96DT0 336 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 MRPL48Q96GC5 212 aaKnown RBP4.33□□□□□ -1.72
CLIP1-217ENST00000543205 OR14A2Q96R54 314 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 AMELYQ99218 206 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 TTTY10Q9BZA0 68 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 OR2J1Q9GZK6 312 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 NIPAL2Q9H841 368 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 AMBNQ9NP70 447 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 FZR1Q9UM11 496 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 COPS3Q9UNS2 423 aa4.33□□□□□ -1.72
CLIP1-217ENST00000543205 PRELID1Q9Y255 219 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms