RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 GLT8D1Q68CQ7 371 aa15.64■□□□□ 0.09
VPS33A-205ENST00000541169 ASCL4Q6XD76 172 aa15.64■□□□□ 0.09
VPS33A-205ENST00000541169 ZNF841Q6ZN19 808 aa15.64■□□□□ 0.09
VPS33A-205ENST00000541169 C19orf18Q8NEA5 215 aa15.64■□□□□ 0.09
VPS33A-205ENST00000541169 OR51A2Q8NGJ7 313 aa15.64■□□□□ 0.09
VPS33A-205ENST00000541169 TMEM203Q969S6 136 aa15.64■□□□□ 0.09
VPS33A-205ENST00000541169 SNTG1Q9NSN8 517 aa15.64■□□□□ 0.09
VPS33A-205ENST00000541169 IL36GQ9NZH8 169 aa15.64■□□□□ 0.09
VPS33A-205ENST00000541169 GHRLQ9UBU3 117 aa15.64■□□□□ 0.09
VPS33A-205ENST00000541169 VPS13CQ709C8 3753 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 IGKV1D-17A0A075B6S4 117 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 TRAV8-7A0A075B6U6 113 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 TRDV1A0A1B0GX56 115 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 RFPL4AA6NLU0 287 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 RFPL4AL1F8VTS6 287 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 DVL1O14640 695 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 PIN1P1O15428 100 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 CHRM2P08172 466 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 PRDX2P32119 198 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 GMFBP60983 142 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 RPS25P62851 125 aaKnown RBP15.63■□□□□ 0.09
VPS33A-205ENST00000541169 RSU1Q15404 277 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 DCAF12L2Q5VW00 463 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 LYPD2Q6UXB3 125 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 BTNL3Q6UXE8 466 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 LURAP1LQ8IV03 231 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 Q8NFD4 153 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 TNFAIP8L1Q8WVP5 186 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 EMG1Q92979 244 aaKnown RBP15.63■□□□□ 0.09
VPS33A-205ENST00000541169 SPACA5Q96QH8 159 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 CCL13Q99616 98 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 METTL9Q9H1A3 318 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 GSX1Q9H4S2 264 aaPredicted RBP15.63■□□□□ 0.09
VPS33A-205ENST00000541169 HMG20AQ9NP66 347 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 ZNF222Q9UK12 451 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 CDC42EP3Q9UKI2 254 aa15.63■□□□□ 0.09
VPS33A-205ENST00000541169 LOC105371242A0A075B767 164 aa15.62■□□□□ 0.09
VPS33A-205ENST00000541169 A0A1W2PPK0 400 aa15.62■□□□□ 0.09
VPS33A-205ENST00000541169 GABRPO00591 440 aa15.62■□□□□ 0.09
VPS33A-205ENST00000541169 SH2D1BO14796 132 aa15.62■□□□□ 0.09
VPS33A-205ENST00000541169 SPRY1O43609 319 aaPredicted RBP15.62■□□□□ 0.09
VPS33A-205ENST00000541169 ENSAO43768 121 aaKnown RBP15.62■□□□□ 0.09
VPS33A-205ENST00000541169 MAS1P04201 325 aa15.62■□□□□ 0.09
VPS33A-205ENST00000541169 GABRA2P47869 451 aa15.62■□□□□ 0.09
VPS33A-205ENST00000541169 LCN2P80188 198 aa15.62■□□□□ 0.09
VPS33A-205ENST00000541169 HNRNPA0Q13151 305 aaKnown RBP15.62■□□□□ 0.09
VPS33A-205ENST00000541169 SSX1Q16384 188 aa15.62■□□□□ 0.09
VPS33A-205ENST00000541169 TMEM91Q6ZNR0 172 aa15.62■□□□□ 0.09
VPS33A-205ENST00000541169 JAGN1Q8N5M9 183 aa15.62■□□□□ 0.09
VPS33A-205ENST00000541169 CHST4Q8NCG5 386 aa15.62■□□□□ 0.09
VPS33A-205ENST00000541169 OR5T2Q8NGG2 359 aa15.62■□□□□ 0.09
VPS33A-205ENST00000541169 OR5D13Q8NGL4 314 aa15.62■□□□□ 0.09
VPS33A-205ENST00000541169 TBC1D15Q8TC07 691 aa15.62■□□□□ 0.09
VPS33A-205ENST00000541169 RFT1Q96AA3 541 aa15.62■□□□□ 0.09
VPS33A-205ENST00000541169 MRPS24Q96EL2 167 aaKnown RBP15.62■□□□□ 0.09
VPS33A-205ENST00000541169 POM121Q96HA1 1249 aa15.62■□□□□ 0.09
VPS33A-205ENST00000541169 ZNF488Q96MN9 340 aa15.62■□□□□ 0.09
VPS33A-205ENST00000541169 CTSZQ9UBR2 303 aa15.62■□□□□ 0.09
VPS33A-205ENST00000541169 DOCK11Q5JSL3 2073 aa15.61■□□□□ 0.09
VPS33A-205ENST00000541169 KIAA1324LA8MWY0 1029 aaPredicted RBP15.61■□□□□ 0.09
VPS33A-205ENST00000541169 H3BUI4 141 aa15.61■□□□□ 0.09
VPS33A-205ENST00000541169 CSTBP04080 98 aaKnown RBP15.61■□□□□ 0.09
VPS33A-205ENST00000541169 UBBP0CG47 229 aa15.61■□□□□ 0.09
VPS33A-205ENST00000541169 PPIAL4GP0DN37 164 aa15.61■□□□□ 0.09
VPS33A-205ENST00000541169 BCL3P20749 454 aa15.61■□□□□ 0.09
VPS33A-205ENST00000541169 FGF9P31371 208 aaPredicted RBP15.61■□□□□ 0.09
VPS33A-205ENST00000541169 RBMXP38159 391 aaKnown RBP15.61■□□□□ 0.09
VPS33A-205ENST00000541169 FGF12P61328 243 aa15.61■□□□□ 0.09
VPS33A-205ENST00000541169 FABP5Q01469 135 aa15.61■□□□□ 0.09
VPS33A-205ENST00000541169 TIMM50Q3ZCQ8 353 aa15.61■□□□□ 0.09
VPS33A-205ENST00000541169 CRIP3Q6Q6R5 217 aa15.61■□□□□ 0.09
VPS33A-205ENST00000541169 LINC00596Q86U02 117 aa15.61■□□□□ 0.09
VPS33A-205ENST00000541169 OR5D18Q8NGL1 313 aa15.61■□□□□ 0.09
VPS33A-205ENST00000541169 PPP1R35Q8TAP8 253 aa15.61■□□□□ 0.09
VPS33A-205ENST00000541169 RAB40AQ8WXH6 277 aa15.61■□□□□ 0.09
VPS33A-205ENST00000541169 GAFA1Q96PS6 74 aa15.61■□□□□ 0.09
VPS33A-205ENST00000541169 FAM192AQ9GZU8 254 aa15.61■□□□□ 0.09
VPS33A-205ENST00000541169 SLC25A10Q9UBX3 287 aaPredicted RBP15.61■□□□□ 0.09
VPS33A-205ENST00000541169 STUB1Q9UNE7 303 aa15.61■□□□□ 0.09
VPS33A-205ENST00000541169 GSTK1Q9Y2Q3 226 aa15.61■□□□□ 0.09
VPS33A-205ENST00000541169 HIVEP2P31629 2446 aa15.6■□□□□ 0.09
VPS33A-205ENST00000541169 CSPG4Q6UVK1 2322 aa15.6■□□□□ 0.09
VPS33A-205ENST00000541169 TRAV1-2A0A0B4J238 106 aa15.6■□□□□ 0.09
VPS33A-205ENST00000541169 KIR2DS1A0A191URI9 304 aa15.6■□□□□ 0.09
VPS33A-205ENST00000541169 TRIM64CA6NLI5 447 aa15.6■□□□□ 0.09
VPS33A-205ENST00000541169 PDCD5O14737 125 aa15.6■□□□□ 0.09
VPS33A-205ENST00000541169 PHF1O43189 567 aaPredicted RBP15.6■□□□□ 0.09
VPS33A-205ENST00000541169 ANGPTL7O43827 346 aa15.6■□□□□ 0.09
VPS33A-205ENST00000541169 INMTO95050 263 aa15.6■□□□□ 0.09
VPS33A-205ENST00000541169 CD37P11049 281 aa15.6■□□□□ 0.09
VPS33A-205ENST00000541169 JUNBP17275 347 aaPredicted RBP15.6■□□□□ 0.09
VPS33A-205ENST00000541169 PRKACAP17612 351 aa15.6■□□□□ 0.09
VPS33A-205ENST00000541169 MYL9P24844 172 aa15.6■□□□□ 0.09
VPS33A-205ENST00000541169 ZFP36P26651 326 aaKnown RBP15.6■□□□□ 0.09
VPS33A-205ENST00000541169 CAPZA1P52907 286 aa15.6■□□□□ 0.09
VPS33A-205ENST00000541169 SEC61A1P61619 476 aaKnown RBP15.6■□□□□ 0.09
VPS33A-205ENST00000541169 SCGB2A2Q13296 93 aa15.6■□□□□ 0.09
VPS33A-205ENST00000541169 NEDD8Q15843 81 aa15.6■□□□□ 0.09
VPS33A-205ENST00000541169 NHLRC3Q5JS37 347 aa15.6■□□□□ 0.09
VPS33A-205ENST00000541169 MUL1Q969V5 352 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms