RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 IGKV1-9A0A0C4DH69 117 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 TRBV2A0A0J9YWF9 115 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 BTBD17A6NE02 478 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 TMEM212A6NML5 194 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 H0YAE9 185 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 J3QLW9 94 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 K7N7A8 449 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 CYB5AP00167 134 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 PAHP00439 452 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 IGHV4-59P01825 116 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 CHRM2P08172 466 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 CCDC159P0C7I6 412 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 ZNF19P17023 458 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 ATF1P18846 271 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 AZGP1P25311 298 aaKnown RBP9.46□□□□□ -0.9
RTN3-209ENST00000538995 SAA4P35542 130 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 CEBPDP49716 269 aaPredicted RBP9.46□□□□□ -0.9
RTN3-209ENST00000538995 KLRD1Q13241 179 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 MIDNQ504T8 468 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 KLHL22Q53GT1 634 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 GDPGP1Q6ZNW5 385 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 SLC25A26Q70HW3 274 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 MKXQ8IYA7 352 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 ZNF676Q8N7Q3 588 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 ZNF555Q8NEP9 628 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 SLAMF9Q96A28 289 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 SLITRK2Q9H156 845 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 BEX1Q9HBH7 125 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 ERVK13-1Q9NX77 482 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 OR14J1Q9UGF5 321 aa9.46□□□□□ -0.9
RTN3-209ENST00000538995 MEIOCA2RUB1 952 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 ZNF737O75373 536 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 ALX3O95076 343 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 BAG2O95816 211 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 RBP4P02753 201 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 RAG2P55895 527 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 MTCP1P56278 107 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 COL10A1Q03692 680 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 SPIN3Q5JUX0 258 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 TMEM200BQ69YZ2 307 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 LHFPL3Q86UP9 236 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 OR8H2Q8N162 312 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 PACRGLQ8N7B6 248 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 ASCC1Q8N9N2 400 aaKnown RBP9.45□□□□□ -0.9
RTN3-209ENST00000538995 OR52I1Q8NGK6 324 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 OR13C3Q8NGS6 347 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 OR5R1Q8NH85 324 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 APH1BQ8WW43 257 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 EMG1Q92979 244 aaKnown RBP9.45□□□□□ -0.9
RTN3-209ENST00000538995 FGGYQ96C11 551 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 OPALINQ96PE5 141 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 ZNF649Q9BS31 505 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 COMMD4Q9H0A8 199 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 HEXA-AS1Q9H8Q6 139 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 RHOFQ9HBH0 211 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 TNFRSF19Q9NS68 423 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 C1RLQ9NZP8 487 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 AASSQ9UDR5 926 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 VPREB3Q9UKI3 123 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 MYRFQ9Y2G1 1151 aa9.45□□□□□ -0.9
RTN3-209ENST00000538995 IRGMA1A4Y4 181 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 F8VVB4 439 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 F8VWA3 439 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 ANGPTL7O43827 346 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 GPR137BO60478 399 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 OCM2P0CE71 109 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 OCMP0CE72 109 aaPredicted RBP9.44□□□□□ -0.9
RTN3-209ENST00000538995 MDKP21741 143 aaPredicted RBP9.44□□□□□ -0.9
RTN3-209ENST00000538995 DCKP27707 260 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 POU3F4P49335 361 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 GBX2P52951 348 aaPredicted RBP9.44□□□□□ -0.9
RTN3-209ENST00000538995 DLX1P56177 255 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 ERVFRD-1P60508 538 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 PDZK1IP1Q13113 114 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 ZNF146Q15072 292 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 AANATQ16613 207 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 PRR31Q5SQ13 230 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 TTC23Q5W5X9 447 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 HCP5Q6MZN7 132 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 GDPD3Q7L5L3 318 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 SAXO1Q8IYX7 474 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 FAM58AQ8N1B3 248 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 BATF2Q8N1L9 274 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 C11orf42Q8N5U0 333 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 BEND2Q8NDZ0 799 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 OR51A4Q8NGJ6 313 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 OR10AC1Q8NH08 325 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 SNX22Q96L94 193 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 ZNF696Q9H7X3 374 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 ISG20L2Q9H9L3 353 aaKnown RBP9.44□□□□□ -0.9
RTN3-209ENST00000538995 AMBNQ9NP70 447 aa9.44□□□□□ -0.9
RTN3-209ENST00000538995 FGF20Q9NP95 211 aaPredicted RBP9.44□□□□□ -0.9
RTN3-209ENST00000538995 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.44□□□□□ -0.9
RTN3-209ENST00000538995 TRRAPQ9Y4A5 3859 aa9.43□□□□□ -0.9
RTN3-209ENST00000538995 C17orf98A8MV24 154 aa9.43□□□□□ -0.9
RTN3-209ENST00000538995 WBP4O75554 376 aaKnown RBP9.43□□□□□ -0.9
RTN3-209ENST00000538995 ZFPL1O95159 310 aa9.43□□□□□ -0.9
RTN3-209ENST00000538995 HAND1O96004 215 aa9.43□□□□□ -0.9
RTN3-209ENST00000538995 DLX6P56179 175 aa9.43□□□□□ -0.9
RTN3-209ENST00000538995 RELBQ01201 579 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms