RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 CEP19Q96LK0 163 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 ZNF48Q96MX3 618 aaPredicted RBP11.29□□□□□ -0.6
CD9-208ENST00000538834 COMMD4Q9H0A8 199 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 RHOFQ9HBH0 211 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 SLC25A10Q9UBX3 287 aaPredicted RBP11.29□□□□□ -0.6
CD9-208ENST00000538834 ZNF281Q9Y2X9 895 aa11.29□□□□□ -0.6
CD9-208ENST00000538834 CENPVL3A0A0U1RRI6 287 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 K7N7A8 449 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 TCF21O43680 179 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 KDM4BO94953 1096 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 ZNF20P17024 532 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 MYL12AP19105 171 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 NPBWR2P48146 333 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 WNT4P56705 351 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 BDH1Q02338 343 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 SLC25A26Q70HW3 274 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 AHSA2Q719I0 299 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 LYPD6Q86Y78 171 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 MKXQ8IYA7 352 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 Q8IYB0 196 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 BCL6BQ8N143 479 aaPredicted RBP11.28□□□□□ -0.6
CD9-208ENST00000538834 ZDHHC22Q8N966 263 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 OR5D14Q8NGL3 314 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 SPATA3Q8NHX4 192 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 GPR148Q8TDV2 347 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 ST8SIA4Q92187 359 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 SGCDQ92629 289 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 GHSRQ92847 366 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 C1orf147Q96MC9 270 aaPredicted RBP11.28□□□□□ -0.6
CD9-208ENST00000538834 FAM234AQ9H0X4 552 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 ESM1Q9NQ30 184 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 PCDHGB5Q9Y5G0 923 aa11.28□□□□□ -0.6
CD9-208ENST00000538834 TRBV5-7A0A0A0MS05 114 aa11.27□□□□□ -0.61
CD9-208ENST00000538834 TRBV23-1A0A0A0MS06 115 aa11.27□□□□□ -0.61
CD9-208ENST00000538834 NKX6-3A6NJ46 265 aa11.27□□□□□ -0.61
CD9-208ENST00000538834 SULT1B1O43704 296 aa11.27□□□□□ -0.61
CD9-208ENST00000538834 NXPH2O95156 264 aa11.27□□□□□ -0.61
CD9-208ENST00000538834 SFTPBP07988 381 aa11.27□□□□□ -0.61
CD9-208ENST00000538834 LMO1P25800 156 aa11.27□□□□□ -0.61
CD9-208ENST00000538834 MTCP1P56278 107 aa11.27□□□□□ -0.61
CD9-208ENST00000538834 GMFBP60983 142 aa11.27□□□□□ -0.61
CD9-208ENST00000538834 MED21Q13503 144 aa11.27□□□□□ -0.61
CD9-208ENST00000538834 KISS1Q15726 138 aa11.27□□□□□ -0.61
CD9-208ENST00000538834 ARMCX4Q5H9R4 360 aa11.27□□□□□ -0.61
CD9-208ENST00000538834 PHC2Q8IXK0 858 aa11.27□□□□□ -0.61
CD9-208ENST00000538834 ZSCAN4Q8NAM6 433 aaPredicted RBP11.27□□□□□ -0.61
CD9-208ENST00000538834 OR13C9Q8NGT0 318 aa11.27□□□□□ -0.61
CD9-208ENST00000538834 TMEM158Q8WZ71 300 aa11.27□□□□□ -0.61
CD9-208ENST00000538834 SLAMF9Q96A28 289 aa11.27□□□□□ -0.61
CD9-208ENST00000538834 SLC6A7Q99884 636 aa11.27□□□□□ -0.61
CD9-208ENST00000538834 HMG20AQ9NP66 347 aa11.27□□□□□ -0.61
CD9-208ENST00000538834 DHDHQ9UQ10 334 aa11.27□□□□□ -0.61
CD9-208ENST00000538834 H0YHG0 523 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 M0R1W7 72 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 TOX4O94842 621 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 TK1P04183 234 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 CHRM2P08172 466 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 CD37P11049 281 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 FSTP19883 344 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 BCL3P20749 454 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 CRHBPP24387 322 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 FPR2P25090 351 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 GABRA2P47869 451 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 CEBPDP49716 269 aaPredicted RBP11.26□□□□□ -0.61
CD9-208ENST00000538834 DLX6P56179 175 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 TAS2R43P59537 309 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 ARF6P62330 175 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 SRSF2Q01130 221 aaKnown RBP11.26□□□□□ -0.61
CD9-208ENST00000538834 IKZF1Q13422 519 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 PDCD1Q15116 288 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 YIF1BQ5BJH7 314 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 ELP2Q6IA86 826 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 UNQ9370/PRO34162Q6UXP9 181 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 IZUMO2Q6UXV1 221 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 C17orf107Q6ZR85 190 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 PXT1Q8NFP0 134 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 OR51A2Q8NGJ7 313 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 SPACA5Q96QH8 159 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 SUCNR1Q9BXA5 334 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 VCX3BQ9H321 246 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 RBFOX1Q9NWB1 397 aaKnown RBP11.26□□□□□ -0.61
CD9-208ENST00000538834 IL36RNQ9UBH0 155 aa11.26□□□□□ -0.61
CD9-208ENST00000538834 SOX21Q9Y651 276 aaPredicted RBP11.26□□□□□ -0.61
CD9-208ENST00000538834 TRAV40A0A0B4J280 105 aa11.25□□□□□ -0.61
CD9-208ENST00000538834 TMEM82A0PJX8 343 aa11.25□□□□□ -0.61
CD9-208ENST00000538834 PIN1P1O15428 100 aa11.25□□□□□ -0.61
CD9-208ENST00000538834 SPRY1O43609 319 aaPredicted RBP11.25□□□□□ -0.61
CD9-208ENST00000538834 SC5DO75845 299 aa11.25□□□□□ -0.61
CD9-208ENST00000538834 HSPA13P48723 471 aa11.25□□□□□ -0.61
CD9-208ENST00000538834 COL10A1Q03692 680 aa11.25□□□□□ -0.61
CD9-208ENST00000538834 Q499Y3 187 aa11.25□□□□□ -0.61
CD9-208ENST00000538834 SPIN3Q5JUX0 258 aa11.25□□□□□ -0.61
CD9-208ENST00000538834 HCP5Q6MZN7 132 aa11.25□□□□□ -0.61
CD9-208ENST00000538834 FAM58AQ8N1B3 248 aa11.25□□□□□ -0.61
CD9-208ENST00000538834 STX19Q8N4C7 294 aa11.25□□□□□ -0.61
CD9-208ENST00000538834 OR51T1Q8NGJ9 327 aa11.25□□□□□ -0.61
CD9-208ENST00000538834 OR13C5Q8NGS8 318 aa11.25□□□□□ -0.61
CD9-208ENST00000538834 ZNF418Q8TF45 676 aaPredicted RBP11.25□□□□□ -0.61
CD9-208ENST00000538834 TMEM106AQ96A25 262 aa11.25□□□□□ -0.61
CD9-208ENST00000538834 ELL3Q9HB65 397 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms