RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 ST8SIA2Q92186 375 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 PIGCQ92535 297 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 TMEM230Q96A57 120 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 PIK3IP1Q96FE7 263 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 GMPPAQ96IJ6 420 aaPredicted RBP5.74□□□□□ -1.49
USP28-206ENST00000538224 C2orf50Q96LR7 162 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 SYT3Q9BQG1 590 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 PAPOLGQ9BWT3 736 aaKnown RBP5.74□□□□□ -1.49
USP28-206ENST00000538224 SUCNR1Q9BXA5 334 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 HES7Q9BYE0 225 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 ZDHHC11Q9H8X9 412 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 FN3KRPQ9HA64 309 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 DECR2Q9NUI1 292 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 DCAF16Q9NXF7 216 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 RDH8Q9NYR8 311 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 PLA2G3Q9NZ20 509 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 DNAJB11Q9UBS4 358 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 AK3Q9UIJ7 227 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 NUP50Q9UKX7 468 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 ST3GAL6Q9Y274 331 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 KCNIP3Q9Y2W7 256 aa5.74□□□□□ -1.49
USP28-206ENST00000538224 FRYLO94915 3013 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 NCOR1O75376 2440 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 IGKV1-27A0A075B6S5 117 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 KIR2DS1A0A191URI9 304 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 PQLC2LA1A4F0 135 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 CRYM-AS1A6NIL9 109 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 ARGFXA6NJG6 315 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 ZNF850A8MQ14 1090 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 EEF1E1-BLOC1S5C9J1V9 151 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 KRBOX1C9JBD0 128 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 TRAPPC2LH3BP13 241 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 ANGPTL7O43827 346 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 SPDEFO95238 335 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 CNOT4O95628 575 aaKnown RBP5.73□□□□□ -1.49
USP28-206ENST00000538224 CRYZL1O95825 349 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 PLATP00750 562 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 IGHV3-9P01782 118 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 IGHG3P01860 377 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 PDGFAP04085 211 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 GLAP06280 429 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 NMBP08949 121 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 FTH1P19P0C7X4 201 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 PATE4P0C8F1 98 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 ZNF728P0DKX0 622 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 LYL1P12980 280 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 TPT1P13693 172 aaKnown RBP5.73□□□□□ -1.49
USP28-206ENST00000538224 ZP3P21754 424 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 KIR2DS4P43632 304 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 UCP3P55916 312 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 FGF12P61328 243 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 HERV-K104P61576 105 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 RAB1AP62820 205 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 NAAAQ02083 359 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 PRDX4Q13162 271 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 IL13RA2Q14627 380 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 SMCO1Q147U7 214 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 KIR2DS1Q14954 304 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 TAF9Q16594 264 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 AANATQ16613 207 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 TBC1D28Q2M2D7 210 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 ABCA11PQ4W5N1 156 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 ZNF660Q6AZW8 331 aaPredicted RBP5.73□□□□□ -1.49
USP28-206ENST00000538224 PRSS54Q6PEW0 395 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 UNQ6126/PRO20091Q6UXV3 157 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 TFAP2EQ6VUC0 442 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.73□□□□□ -1.49
USP28-206ENST00000538224 ZNF573Q86YE8 665 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 SLC38A6Q8IZM9 456 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 FBXL14Q8N1E6 418 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 EIF4E3Q8N5X7 224 aaKnown RBP5.73□□□□□ -1.49
USP28-206ENST00000538224 SUMF1Q8NBK3 374 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 CPEB3Q8NE35 698 aaKnown RBP5.73□□□□□ -1.49
USP28-206ENST00000538224 OR10AD1Q8NGE0 317 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 FGFBP3Q8TAT2 258 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 STOML3Q8TAV4 291 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 DCUN1D4Q92564 292 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 GTF3AQ92664 365 aaKnown RBP5.73□□□□□ -1.49
USP28-206ENST00000538224 RBPMSQ93062 196 aaKnown RBP5.73□□□□□ -1.49
USP28-206ENST00000538224 WDYHV1Q96HA8 205 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 POM121L2Q96KW2 1035 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 ZNF2Q9BSG1 426 aaPredicted RBP5.73□□□□□ -1.49
USP28-206ENST00000538224 RTBDNQ9BSG5 229 aaPredicted RBP5.73□□□□□ -1.49
USP28-206ENST00000538224 PKIBQ9C010 78 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 DNTTIP1Q9H147 329 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 RIMS4Q9H426 269 aaPredicted RBP5.73□□□□□ -1.49
USP28-206ENST00000538224 ZNF442Q9H7R0 627 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 METTL8Q9H825 291 aaKnown RBP5.73□□□□□ -1.49
USP28-206ENST00000538224 MBD2Q9UBB5 411 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 LHX6Q9UPM6 363 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 STARD10Q9Y365 291 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 CSAG2Q9Y5P2 127 aa5.73□□□□□ -1.49
USP28-206ENST00000538224 A0A096LPE4 126 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 TRAV17A0A0B4J275 112 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 TEX13DA0A0J9YY54 714 aaPredicted RBP5.72□□□□□ -1.49
USP28-206ENST00000538224 C13orf42A0A1B0GVH6 325 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 A0A1W2PPZ6 126 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 RNF222A6NCQ9 220 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 CD300LBA8K4G0 201 aa5.72□□□□□ -1.49
USP28-206ENST00000538224 NUDT19A8MXV4 375 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms