RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 ALG8Q9BVK2 526 aa17.58■□□□□ 0.4
CCDC78-215ENST00000538176 MTCH1Q9NZJ7 389 aa17.58■□□□□ 0.4
CCDC78-215ENST00000538176 GLS2Q9UI32 602 aa17.58■□□□□ 0.4
CCDC78-215ENST00000538176 BAG2O95816 211 aa17.57■□□□□ 0.4
CCDC78-215ENST00000538176 IGHA1P01876 353 aa17.57■□□□□ 0.4
CCDC78-215ENST00000538176 ATF1P18846 271 aa17.57■□□□□ 0.4
CCDC78-215ENST00000538176 MTCP1P56278 107 aa17.57■□□□□ 0.4
CCDC78-215ENST00000538176 TMEM200BQ69YZ2 307 aa17.57■□□□□ 0.4
CCDC78-215ENST00000538176 SLC25A26Q70HW3 274 aa17.57■□□□□ 0.4
CCDC78-215ENST00000538176 FGGYQ96C11 551 aa17.57■□□□□ 0.4
CCDC78-215ENST00000538176 PELI1Q96FA3 418 aa17.57■□□□□ 0.4
CCDC78-215ENST00000538176 RHOFQ9HBH0 211 aa17.57■□□□□ 0.4
CCDC78-215ENST00000538176 TNFRSF19Q9NS68 423 aa17.57■□□□□ 0.4
CCDC78-215ENST00000538176 C19orf12Q9NSK7 152 aa17.57■□□□□ 0.4
CCDC78-215ENST00000538176 SMPD3Q9NY59 655 aaPredicted RBP17.57■□□□□ 0.4
CCDC78-215ENST00000538176 ZNRD1Q9P1U0 126 aa17.57■□□□□ 0.4
CCDC78-215ENST00000538176 IGKV1-27A0A075B6S5 117 aa17.56■□□□□ 0.4
CCDC78-215ENST00000538176 MEIOCA2RUB1 952 aa17.56■□□□□ 0.4
CCDC78-215ENST00000538176 H3BSH0 61 aa17.56■□□□□ 0.4
CCDC78-215ENST00000538176 ALX3O95076 343 aa17.56■□□□□ 0.4
CCDC78-215ENST00000538176 MT-ND2P03891 347 aa17.56■□□□□ 0.4
CCDC78-215ENST00000538176 RAG2P55895 527 aa17.56■□□□□ 0.4
CCDC78-215ENST00000538176 NANOS3P60323 173 aaKnown RBP17.56■□□□□ 0.4
CCDC78-215ENST00000538176 LHFPL3Q86UP9 236 aa17.56■□□□□ 0.4
CCDC78-215ENST00000538176 ZNF676Q8N7Q3 588 aa17.56■□□□□ 0.4
CCDC78-215ENST00000538176 ADAT3Q96EY9 351 aaPredicted RBP17.56■□□□□ 0.4
CCDC78-215ENST00000538176 SNX22Q96L94 193 aa17.56■□□□□ 0.4
CCDC78-215ENST00000538176 ZNF696Q9H7X3 374 aa17.56■□□□□ 0.4
CCDC78-215ENST00000538176 ELL3Q9HB65 397 aaPredicted RBP17.56■□□□□ 0.4
CCDC78-215ENST00000538176 C1RLQ9NZP8 487 aa17.56■□□□□ 0.4
CCDC78-215ENST00000538176 TMEM212A6NML5 194 aa17.55■□□□□ 0.4
CCDC78-215ENST00000538176 OR4C45A6NMZ5 311 aa17.55■□□□□ 0.4
CCDC78-215ENST00000538176 IGHV4-59P01825 116 aa17.55■□□□□ 0.4
CCDC78-215ENST00000538176 CCDC159P0C7I6 412 aa17.55■□□□□ 0.4
CCDC78-215ENST00000538176 AZGP1P25311 298 aaKnown RBP17.55■□□□□ 0.4
CCDC78-215ENST00000538176 SAA4P35542 130 aa17.55■□□□□ 0.4
CCDC78-215ENST00000538176 ERVFRD-1P60508 538 aa17.55■□□□□ 0.4
CCDC78-215ENST00000538176 COL10A1Q03692 680 aa17.55■□□□□ 0.4
CCDC78-215ENST00000538176 GDPD3Q7L5L3 318 aa17.55■□□□□ 0.4
CCDC78-215ENST00000538176 ASCC1Q8N9N2 400 aaKnown RBP17.55■□□□□ 0.4
CCDC78-215ENST00000538176 ZSCAN4Q8NAM6 433 aaPredicted RBP17.55■□□□□ 0.4
CCDC78-215ENST00000538176 BEND2Q8NDZ0 799 aa17.55■□□□□ 0.4
CCDC78-215ENST00000538176 OR13C3Q8NGS6 347 aa17.55■□□□□ 0.4
CCDC78-215ENST00000538176 PPP1R35Q8TAP8 253 aa17.55■□□□□ 0.4
CCDC78-215ENST00000538176 OPALINQ96PE5 141 aa17.55■□□□□ 0.4
CCDC78-215ENST00000538176 COMMD4Q9H0A8 199 aa17.55■□□□□ 0.4
CCDC78-215ENST00000538176 ERVK13-1Q9NX77 482 aa17.55■□□□□ 0.4
CCDC78-215ENST00000538176 TRBV2A0A0J9YWF9 115 aa17.54■□□□□ 0.4
CCDC78-215ENST00000538176 IRGMA1A4Y4 181 aa17.54■□□□□ 0.4
CCDC78-215ENST00000538176 CLPSL1A2RUU4 121 aa17.54■□□□□ 0.4
CCDC78-215ENST00000538176 GPR137BO60478 399 aa17.54■□□□□ 0.4
CCDC78-215ENST00000538176 RBP4P02753 201 aa17.54■□□□□ 0.4
CCDC78-215ENST00000538176 MDKP21741 143 aaPredicted RBP17.54■□□□□ 0.4
CCDC78-215ENST00000538176 GBX2P52951 348 aaPredicted RBP17.54■□□□□ 0.4
CCDC78-215ENST00000538176 MEF2CQ06413 473 aaPredicted RBP17.54■□□□□ 0.4
CCDC78-215ENST00000538176 AANATQ16613 207 aa17.54■□□□□ 0.4
CCDC78-215ENST00000538176 SPIN3Q5JUX0 258 aa17.54■□□□□ 0.4
CCDC78-215ENST00000538176 SERPINA12Q8IW75 414 aa17.54■□□□□ 0.4
CCDC78-215ENST00000538176 OR8H2Q8N162 312 aa17.54■□□□□ 0.4
CCDC78-215ENST00000538176 OR5D14Q8NGL3 314 aa17.54■□□□□ 0.4
CCDC78-215ENST00000538176 EMG1Q92979 244 aaKnown RBP17.54■□□□□ 0.4
CCDC78-215ENST00000538176 SLAMF9Q96A28 289 aa17.54■□□□□ 0.4
CCDC78-215ENST00000538176 VPREB3Q9UKI3 123 aa17.54■□□□□ 0.4
CCDC78-215ENST00000538176 MYRFQ9Y2G1 1151 aa17.54■□□□□ 0.4
CCDC78-215ENST00000538176 IGKV1-9A0A0C4DH69 117 aa17.53■□□□□ 0.4
CCDC78-215ENST00000538176 ANGPTL7O43827 346 aa17.53■□□□□ 0.4
CCDC78-215ENST00000538176 ZNF737O75373 536 aa17.53■□□□□ 0.4
CCDC78-215ENST00000538176 OMGP23515 440 aa17.53■□□□□ 0.4
CCDC78-215ENST00000538176 PEX2P28328 305 aa17.53■□□□□ 0.4
CCDC78-215ENST00000538176 TGFBR2P37173 567 aa17.53■□□□□ 0.4
CCDC78-215ENST00000538176 CEBPDP49716 269 aaPredicted RBP17.53■□□□□ 0.4
CCDC78-215ENST00000538176 PDZK1IP1Q13113 114 aa17.53■□□□□ 0.4
CCDC78-215ENST00000538176 KLRD1Q13241 179 aa17.53■□□□□ 0.4
CCDC78-215ENST00000538176 ZNF146Q15072 292 aa17.53■□□□□ 0.4
CCDC78-215ENST00000538176 PRR31Q5SQ13 230 aa17.53■□□□□ 0.4
CCDC78-215ENST00000538176 TTC23Q5W5X9 447 aa17.53■□□□□ 0.4
CCDC78-215ENST00000538176 OLFML2AQ68BL7 652 aa17.53■□□□□ 0.4
CCDC78-215ENST00000538176 C17orf107Q6ZR85 190 aa17.53■□□□□ 0.4
CCDC78-215ENST00000538176 FAM58AQ8N1B3 248 aa17.53■□□□□ 0.4
CCDC78-215ENST00000538176 DTX3Q8N9I9 347 aa17.53■□□□□ 0.4
CCDC78-215ENST00000538176 OR4M1Q8NGD0 313 aa17.53■□□□□ 0.4
CCDC78-215ENST00000538176 CPNE2Q96FN4 548 aaPredicted RBP17.53■□□□□ 0.4
CCDC78-215ENST00000538176 JAM3Q9BX67 310 aa17.53■□□□□ 0.4
CCDC78-215ENST00000538176 MEGF9Q9H1U4 602 aa17.53■□□□□ 0.4
CCDC78-215ENST00000538176 ZCCHC4Q9H5U6 513 aa17.53■□□□□ 0.4
CCDC78-215ENST00000538176 AMBNQ9NP70 447 aa17.53■□□□□ 0.4
CCDC78-215ENST00000538176 AASSQ9UDR5 926 aa17.53■□□□□ 0.4
CCDC78-215ENST00000538176 PCDHGB5Q9Y5G0 923 aa17.53■□□□□ 0.4
CCDC78-215ENST00000538176 NBEAL1Q6ZS30 2694 aa17.53■□□□□ 0.4
CCDC78-215ENST00000538176 C17orf98A8MV24 154 aa17.52■□□□□ 0.4
CCDC78-215ENST00000538176 SPRY1O43609 319 aaPredicted RBP17.52■□□□□ 0.4
CCDC78-215ENST00000538176 DCKP27707 260 aa17.52■□□□□ 0.4
CCDC78-215ENST00000538176 LGALS4P56470 323 aa17.52■□□□□ 0.4
CCDC78-215ENST00000538176 CCDC58Q4VC31 144 aa17.52■□□□□ 0.4
CCDC78-215ENST00000538176 SAXO1Q8IYX7 474 aa17.52■□□□□ 0.4
CCDC78-215ENST00000538176 C11orf42Q8N5U0 333 aa17.52■□□□□ 0.4
CCDC78-215ENST00000538176 PACRGLQ8N7B6 248 aa17.52■□□□□ 0.4
CCDC78-215ENST00000538176 OR52I1Q8NGK6 324 aa17.52■□□□□ 0.4
CCDC78-215ENST00000538176 OR5AK2Q8NH90 309 aa17.52■□□□□ 0.4
CCDC78-215ENST00000538176 ZNF649Q9BS31 505 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms