RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 PRRG2O14669 202 aa11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 ABCD4O14678 606 aa11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 CDC14BO60729 498 aa11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 TAS2R31P59538 309 aa11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 HIST1H3AP68431 136 aa11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 PPP1R1AQ13522 171 aa11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 FAM74A3Q4VXF1 159 aa11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 HIST2H3PS2Q5TEC6 136 aa11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 FBXW9Q5XUX1 488 aa11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 OR52W1Q6IF63 320 aa11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 C17orf107Q6ZR85 190 aa11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 HIST2H3AQ71DI3 136 aa11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 SKA3Q8IX90 412 aa11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 ZNF101Q8IZC7 436 aa11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 FAM89BQ8N5H3 189 aa11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 CCDC54Q8NEL0 328 aa11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 PHB2Q99623 299 aa11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 OCSTAMPQ9BR26 566 aa11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 SOX7Q9BT81 388 aa11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 DNTTIP1Q9H147 329 aa11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 GLRX2Q9NS18 164 aa11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 ZNF230Q9UIE0 474 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 ZNF835Q9Y2P0 537 aa11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 KLF2Q9Y5W3 355 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-202ENST00000536708 A0A0U1RQV5 110 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 DBX1A6NMT0 343 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 OR2AT4A6NND4 320 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 DUS4LO95620 317 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 PLATP00750 562 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 IFNA6P05013 189 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 GLI4P10075 376 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 HIST1H1DP16402 221 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 CBX5P45973 191 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 TMEM50BP56557 158 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 IL13RA1P78552 427 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 ECH1Q13011 328 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 SLC22A6Q4U2R8 563 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 HIKESHIQ53FT3 197 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 PLAC9Q5JTB6 97 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 FAM27BQ5VT28 67 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 SHEQ5VZ18 495 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 OR2A2Q6IF42 318 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 ARRDC1Q8N5I2 433 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 ZNF283Q8N7M2 679 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 OR56B1Q8NGI3 324 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 OR10K1Q8NGX5 313 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 STARD4Q96DR4 205 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 NICN1Q9BSH3 213 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 BARX1Q9HBU1 254 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 COMMD9Q9P000 198 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 IGKV1-9A0A0C4DH69 117 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 RPL36A-HNRNPH2H7BZ11 118 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 MFNGO00587 321 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 SIGLEC5O15389 551 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 LYZL6O75951 148 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 CSN2P05814 226 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 EDN3P14138 238 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 ZNF32P17041 273 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 THBS4P35443 961 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 GUCA1AP43080 201 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 ACOT7LQ6ZUV0 252 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 RNF144BQ7Z419 303 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 TMEM17Q86X19 198 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 TMEM104Q8NE00 496 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 GJC3Q8NFK1 279 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 OR4K15Q8NH41 348 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 C10orf35Q96D05 121 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 RAB3CQ96E17 227 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 URM1Q9BTM9 101 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 TMEM59Q9BXS4 323 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 FN3KRPQ9HA64 309 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 FBXO9Q9UK97 447 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 V9GYS6 101 aa11.19□□□□□ -0.62
CDK5RAP3-202ENST00000536708 A0A0B4J2A0 478 aa11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 A0A1W2PR80 420 aa11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 FOXI3A8MTJ6 420 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 SOCS1O15524 211 aa11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 RAD51DO75771 328 aa11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 MPIG6BO95866 241 aa11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 CGAP01215 116 aa11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 HLA-HP01893 362 aa11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 SLC2A1P11166 492 aa11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 NAT2P11245 290 aa11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 IGHV1-2P23083 117 aa11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 OTX1P32242 354 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 PTGER4P35408 488 aa11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 OR3A4PP47883 348 aa11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 DEFA5Q01523 94 aa11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 PABPC1L2AQ5JQF8 200 aa11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 FAM57BQ71RH2 274 aa11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 TMEM185AQ8NFB2 350 aa11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 BPIFCQ8NFQ6 507 aa11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 AKR7LQ8NHP1 331 aa11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 TERB2Q8NHR7 220 aa11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 PPP1R1CQ8WVI7 109 aa11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 PHYHIPLQ96FC7 376 aa11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 FAM71F1Q96KD3 344 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 PDCD10Q9BUL8 212 aa11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 NKX6-2Q9C056 277 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP3-202ENST00000536708 SHPKQ9UHJ6 478 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms