RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 M0QZ24 198 aa10.21□□□□□ -0.77
PRKDC-207ENST00000536483 M0R1W7 72 aa10.21□□□□□ -0.77
PRKDC-207ENST00000536483 SYNGR1O43759 233 aa10.21□□□□□ -0.77
PRKDC-207ENST00000536483 WBP4O75554 376 aaKnown RBP10.21□□□□□ -0.77
PRKDC-207ENST00000536483 SERPINA3P01011 423 aa10.21□□□□□ -0.77
PRKDC-207ENST00000536483 IGHV1-69P01742 117 aa10.21□□□□□ -0.77
PRKDC-207ENST00000536483 MT-ND2P03891 347 aa10.21□□□□□ -0.77
PRKDC-207ENST00000536483 ARF6P62330 175 aa10.21□□□□□ -0.77
PRKDC-207ENST00000536483 KLHL22Q53GT1 634 aa10.21□□□□□ -0.77
PRKDC-207ENST00000536483 CALHM1Q8IU99 346 aa10.21□□□□□ -0.77
PRKDC-207ENST00000536483 ZNF561Q8N587 486 aa10.21□□□□□ -0.77
PRKDC-207ENST00000536483 Q8N7P7 452 aa10.21□□□□□ -0.77
PRKDC-207ENST00000536483 ZNF555Q8NEP9 628 aa10.21□□□□□ -0.77
PRKDC-207ENST00000536483 GATAD2BQ8WXI9 593 aa10.21□□□□□ -0.77
PRKDC-207ENST00000536483 TNFRSF14Q92956 283 aa10.21□□□□□ -0.77
PRKDC-207ENST00000536483 MMP27Q9H306 513 aa10.21□□□□□ -0.77
PRKDC-207ENST00000536483 FGF20Q9NP95 211 aaPredicted RBP10.21□□□□□ -0.77
PRKDC-207ENST00000536483 SNTG1Q9NSN8 517 aa10.21□□□□□ -0.77
PRKDC-207ENST00000536483 ERVK13-1Q9NX77 482 aa10.21□□□□□ -0.77
PRKDC-207ENST00000536483 AASSQ9UDR5 926 aa10.21□□□□□ -0.77
PRKDC-207ENST00000536483 POMT1Q9Y6A1 747 aa10.21□□□□□ -0.77
PRKDC-207ENST00000536483 IGKV1-27A0A075B6S5 117 aa10.2□□□□□ -0.78
PRKDC-207ENST00000536483 IGKV1-9A0A0C4DH69 117 aa10.2□□□□□ -0.78
PRKDC-207ENST00000536483 TIMM23O14925 209 aa10.2□□□□□ -0.78
PRKDC-207ENST00000536483 SMIM18P0DKX4 95 aa10.2□□□□□ -0.78
PRKDC-207ENST00000536483 SELLP14151 372 aa10.2□□□□□ -0.78
PRKDC-207ENST00000536483 PRDX2P32119 198 aa10.2□□□□□ -0.78
PRKDC-207ENST00000536483 ALKBH1Q13686 389 aaKnown RBP10.2□□□□□ -0.78
PRKDC-207ENST00000536483 DMRTC1Q5HYR2 192 aa10.2□□□□□ -0.78
PRKDC-207ENST00000536483 ASPHD2Q6ICH7 369 aa10.2□□□□□ -0.78
PRKDC-207ENST00000536483 CMTM4Q8IZR5 234 aa10.2□□□□□ -0.78
PRKDC-207ENST00000536483 RDH10Q8IZV5 341 aa10.2□□□□□ -0.78
PRKDC-207ENST00000536483 CD177Q8N6Q3 437 aa10.2□□□□□ -0.78
PRKDC-207ENST00000536483 TSPAN14Q8NG11 270 aa10.2□□□□□ -0.78
PRKDC-207ENST00000536483 SSMEM1Q8WWF3 244 aa10.2□□□□□ -0.78
PRKDC-207ENST00000536483 SPSB1Q96BD6 273 aa10.2□□□□□ -0.78
PRKDC-207ENST00000536483 FAM234AQ9H0X4 552 aa10.2□□□□□ -0.78
PRKDC-207ENST00000536483 PLEKHA1Q9HB21 404 aa10.2□□□□□ -0.78
PRKDC-207ENST00000536483 MTCH1Q9NZJ7 389 aa10.2□□□□□ -0.78
PRKDC-207ENST00000536483 HHLA2Q9UM44 414 aa10.2□□□□□ -0.78
PRKDC-207ENST00000536483 RNF114Q9Y508 228 aa10.2□□□□□ -0.78
PRKDC-207ENST00000536483 A6NIN4 97 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 RFPL4AA6NLU0 287 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 RFPL4AL1F8VTS6 287 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 GPR137BO60478 399 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 TFAP2AP05549 437 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 HTR1AP08908 422 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 LIMS3P0CW19 117 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 LIMS4P0CW20 117 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 DCKP27707 260 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 RBP2P50120 134 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 IKZF1Q13422 519 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 CNN3Q15417 329 aaKnown RBP10.19□□□□□ -0.78
PRKDC-207ENST00000536483 ODF4Q2M2E3 257 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 RBM48Q5RL73 367 aaKnown RBP10.19□□□□□ -0.78
PRKDC-207ENST00000536483 ZNF691Q5VV52 312 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 LHFPL3Q86UP9 236 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 ANGPTL5Q86XS5 388 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 LDLRAD3Q86YD5 345 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 Q8IYB0 196 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 ZNRF1Q8ND25 227 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 SETD9Q8NE22 299 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 OR52I1Q8NGK6 324 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 LINC01006Q8NI28 216 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 TBC1D15Q8TC07 691 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 RPS4Y2Q8TD47 263 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 DYRK2Q92630 601 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 LHX4Q969G2 390 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 ADAT3Q96EY9 351 aaPredicted RBP10.19□□□□□ -0.78
PRKDC-207ENST00000536483 C4orf36Q96KX1 117 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 ALG8Q9BVK2 526 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 AMBNQ9NP70 447 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 BLOC1S6Q9UL45 172 aa10.19□□□□□ -0.78
PRKDC-207ENST00000536483 A0A0U1RQK1 487 aa10.18□□□□□ -0.78
PRKDC-207ENST00000536483 J3QLW9 94 aa10.18□□□□□ -0.78
PRKDC-207ENST00000536483 K7N7A8 449 aa10.18□□□□□ -0.78
PRKDC-207ENST00000536483 ZNF701M0R085 212 aaPredicted RBP10.18□□□□□ -0.78
PRKDC-207ENST00000536483 MRPS14O60783 128 aaKnown RBP10.18□□□□□ -0.78
PRKDC-207ENST00000536483 ZNF737O75373 536 aa10.18□□□□□ -0.78
PRKDC-207ENST00000536483 NXPH2O95156 264 aa10.18□□□□□ -0.78
PRKDC-207ENST00000536483 IGHV4-59P01825 116 aa10.18□□□□□ -0.78
PRKDC-207ENST00000536483 ZNF19P17023 458 aa10.18□□□□□ -0.78
PRKDC-207ENST00000536483 ATF1P18846 271 aa10.18□□□□□ -0.78
PRKDC-207ENST00000536483 PRKACBP22694 351 aa10.18□□□□□ -0.78
PRKDC-207ENST00000536483 ALDH3B2P48448 385 aa10.18□□□□□ -0.78
PRKDC-207ENST00000536483 PROK1P58294 105 aa10.18□□□□□ -0.78
PRKDC-207ENST00000536483 RPL15P61313 204 aaKnown RBP10.18□□□□□ -0.78
PRKDC-207ENST00000536483 GUCA2AQ02747 115 aa10.18□□□□□ -0.78
PRKDC-207ENST00000536483 TAF9Q16594 264 aa10.18□□□□□ -0.78
PRKDC-207ENST00000536483 CCDC58Q4VC31 144 aa10.18□□□□□ -0.78
PRKDC-207ENST00000536483 VMO1Q7Z5L0 202 aa10.18□□□□□ -0.78
PRKDC-207ENST00000536483 PDZD9Q8IXQ8 264 aa10.18□□□□□ -0.78
PRKDC-207ENST00000536483 C8orf59Q8N0T1 100 aaPredicted RBP10.18□□□□□ -0.78
PRKDC-207ENST00000536483 PIP4P2Q8N4L2 257 aa10.18□□□□□ -0.78
PRKDC-207ENST00000536483 C11orf42Q8N5U0 333 aa10.18□□□□□ -0.78
PRKDC-207ENST00000536483 PARP16Q8N5Y8 322 aa10.18□□□□□ -0.78
PRKDC-207ENST00000536483 CYGBQ8WWM9 190 aa10.18□□□□□ -0.78
PRKDC-207ENST00000536483 BORCS8Q96FH0 119 aa10.18□□□□□ -0.78
PRKDC-207ENST00000536483 CEP19Q96LK0 163 aa10.18□□□□□ -0.78
PRKDC-207ENST00000536483 ZNF488Q96MN9 340 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms