RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 CCDC159P0C7I6 412 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 BCL3P20749 454 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 PRKACBP22694 351 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 SOX2P48431 317 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 RBP2P50120 134 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 ATP1B3P54709 279 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 AQP4P55087 323 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 COL10A1Q03692 680 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 ST3GAL4Q11206 333 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 MRPL28Q13084 256 aaKnown RBP10.81□□□□□ -0.68
PRKDC-206ENST00000536429 BAMBIQ13145 260 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 CDK5R1Q15078 307 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 PNKDQ8N490 385 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 PIP4P2Q8N4L2 257 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 ZFP41Q8N8Y5 198 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 ZNF485Q8NCK3 441 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 BPIFB6Q8NFQ5 453 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 OR4M1Q8NGD0 313 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 OR13C5Q8NGS8 318 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 FAM216AQ8WUB2 273 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 ZFAND2BQ8WV99 257 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 TNFRSF14Q92956 283 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 OPALINQ96PE5 141 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 JMJD8Q96S16 334 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 MYCBPQ99417 103 aaPredicted RBP10.81□□□□□ -0.68
PRKDC-206ENST00000536429 NKX3-1Q99801 234 aaPredicted RBP10.81□□□□□ -0.68
PRKDC-206ENST00000536429 COMMD4Q9H0A8 199 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 ZCCHC4Q9H5U6 513 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 PSORS1C1Q9UIG5 152 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 DHDHQ9UQ10 334 aa10.81□□□□□ -0.68
PRKDC-206ENST00000536429 EXOSC1Q9Y3B2 195 aaKnown RBP10.81□□□□□ -0.68
PRKDC-206ENST00000536429 A0A1W2PQ09 198 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 A0A1W2PRD5 423 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 A0A1W2PRF3 423 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 A0A1W2PRM7 423 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 IRGMA1A4Y4 181 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 MEX3AA1L020 520 aaKnown RBP10.8□□□□□ -0.68
PRKDC-206ENST00000536429 RNASEK-C17orf49H0YIS7 233 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 TRIM77I1YAP6 450 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 MT-ND2P03891 347 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 TK1P04183 234 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 MYL12AP19105 171 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 DUSP1P28562 367 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 C21orf33P30042 268 aaPredicted RBP10.8□□□□□ -0.68
PRKDC-206ENST00000536429 SNU13P55769 128 aaKnown RBP10.8□□□□□ -0.68
PRKDC-206ENST00000536429 ERVFRD-1P60508 538 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 PDZK1IP1Q13113 114 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 PDCD1Q15116 288 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 SLC9A3R2Q15599 337 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 RPL22L1Q6P5R6 122 aaKnown RBP10.8□□□□□ -0.68
PRKDC-206ENST00000536429 RBMS3Q6XE24 437 aaKnown RBP10.8□□□□□ -0.68
PRKDC-206ENST00000536429 TMPRSS11AQ6ZMR5 421 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 LHFPL2Q6ZUX7 228 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 AHSA2Q719I0 299 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 FAM185AQ8N0U4 392 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 ZNF561Q8N587 486 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 KIR3DL3Q8N743 410 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 OR51A2Q8NGJ7 313 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 TSEN15Q8WW01 171 aaKnown RBP10.8□□□□□ -0.68
PRKDC-206ENST00000536429 SGCDQ92629 289 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 EMG1Q92979 244 aaKnown RBP10.8□□□□□ -0.68
PRKDC-206ENST00000536429 SPSB1Q96BD6 273 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 ORAI1Q96D31 301 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 BABAM2Q9NXR7 383 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 TAS2R4Q9NYW5 299 aa10.8□□□□□ -0.68
PRKDC-206ENST00000536429 A0A0U1RQK1 487 aa10.79□□□□□ -0.68
PRKDC-206ENST00000536429 TMEM82A0PJX8 343 aa10.79□□□□□ -0.68
PRKDC-206ENST00000536429 EFCAB10A6NFE3 127 aa10.79□□□□□ -0.68
PRKDC-206ENST00000536429 SLC1A7O00341 560 aa10.79□□□□□ -0.68
PRKDC-206ENST00000536429 OGG1O15527 345 aa10.79□□□□□ -0.68
PRKDC-206ENST00000536429 HOXA3O43365 443 aaPredicted RBP10.79□□□□□ -0.68
PRKDC-206ENST00000536429 ZNF737O75373 536 aa10.79□□□□□ -0.68
PRKDC-206ENST00000536429 PIPP12273 146 aaPredicted RBP10.79□□□□□ -0.68
PRKDC-206ENST00000536429 PRTN3P24158 256 aa10.79□□□□□ -0.68
PRKDC-206ENST00000536429 ACTG1P63261 375 aa10.79□□□□□ -0.68
PRKDC-206ENST00000536429 ZNF273Q14593 569 aa10.79□□□□□ -0.68
PRKDC-206ENST00000536429 TMEM200BQ69YZ2 307 aa10.79□□□□□ -0.68
PRKDC-206ENST00000536429 HCP5Q6MZN7 132 aa10.79□□□□□ -0.68
PRKDC-206ENST00000536429 PARP16Q8N5Y8 322 aa10.79□□□□□ -0.68
PRKDC-206ENST00000536429 OR52N1Q8NH53 320 aa10.79□□□□□ -0.68
PRKDC-206ENST00000536429 VCXQ9H320 206 aa10.79□□□□□ -0.68
PRKDC-206ENST00000536429 TNFRSF19Q9NS68 423 aa10.79□□□□□ -0.68
PRKDC-206ENST00000536429 PLCXD1Q9NUJ7 323 aa10.79□□□□□ -0.68
PRKDC-206ENST00000536429 FKBP14Q9NWM8 211 aa10.79□□□□□ -0.68
PRKDC-206ENST00000536429 TRRAPQ9Y4A5 3859 aa10.79□□□□□ -0.68
PRKDC-206ENST00000536429 TRBV23-1A0A0A0MS06 115 aa10.78□□□□□ -0.68
PRKDC-206ENST00000536429 PNMA8CA0A1B0GUJ8 204 aa10.78□□□□□ -0.68
PRKDC-206ENST00000536429 K7N7A8 449 aa10.78□□□□□ -0.68
PRKDC-206ENST00000536429 SULT1B1O43704 296 aa10.78□□□□□ -0.68
PRKDC-206ENST00000536429 HAND1O96004 215 aa10.78□□□□□ -0.68
PRKDC-206ENST00000536429 OCM2P0CE71 109 aa10.78□□□□□ -0.68
PRKDC-206ENST00000536429 OCMP0CE72 109 aaPredicted RBP10.78□□□□□ -0.68
PRKDC-206ENST00000536429 CCL3L1P16619 93 aa10.78□□□□□ -0.68
PRKDC-206ENST00000536429 PRKACAP17612 351 aa10.78□□□□□ -0.68
PRKDC-206ENST00000536429 ZP1P60852 638 aa10.78□□□□□ -0.68
PRKDC-206ENST00000536429 RPL31P62899 125 aaKnown RBP10.78□□□□□ -0.68
PRKDC-206ENST00000536429 CCDC58Q4VC31 144 aa10.78□□□□□ -0.68
PRKDC-206ENST00000536429 ZNF529Q6P280 563 aa10.78□□□□□ -0.68
PRKDC-206ENST00000536429 C17orf107Q6ZR85 190 aa10.78□□□□□ -0.68
PRKDC-206ENST00000536429 SERPINA12Q8IW75 414 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms