RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 EXT1Q16394 746 aa10.18□□□□□ -0.78
CHRNB1-202ENST00000536404 AKIRIN2Q53H80 203 aa10.18□□□□□ -0.78
CHRNB1-202ENST00000536404 TMEM128Q5BJH2 165 aa10.18□□□□□ -0.78
CHRNB1-202ENST00000536404 SP5Q6BEB4 398 aaPredicted RBP10.18□□□□□ -0.78
CHRNB1-202ENST00000536404 KLHL24Q6TFL4 600 aa10.18□□□□□ -0.78
CHRNB1-202ENST00000536404 DCXRQ7Z4W1 244 aa10.18□□□□□ -0.78
CHRNB1-202ENST00000536404 MDGA2Q7Z553 956 aa10.18□□□□□ -0.78
CHRNB1-202ENST00000536404 CD163Q86VB7 1156 aa10.18□□□□□ -0.78
CHRNB1-202ENST00000536404 KDM8Q8N371 416 aa10.18□□□□□ -0.78
CHRNB1-202ENST00000536404 UBAC2Q8NBM4 344 aa10.18□□□□□ -0.78
CHRNB1-202ENST00000536404 CHST4Q8NCG5 386 aa10.18□□□□□ -0.78
CHRNB1-202ENST00000536404 BSCL2Q96G97 398 aaPredicted RBP10.18□□□□□ -0.78
CHRNB1-202ENST00000536404 WDR13Q9H1Z4 485 aa10.18□□□□□ -0.78
CHRNB1-202ENST00000536404 SIRT7Q9NRC8 400 aa10.18□□□□□ -0.78
CHRNB1-202ENST00000536404 MRPL22Q9NWU5 206 aaKnown RBP10.18□□□□□ -0.78
CHRNB1-202ENST00000536404 CGGBP1Q9UFW8 167 aaPredicted RBP10.18□□□□□ -0.78
CHRNB1-202ENST00000536404 GAB2Q9UQC2 676 aa10.18□□□□□ -0.78
CHRNB1-202ENST00000536404 ABCA12Q86UK0 2595 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 ALG1L2C9J202 215 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 GGCTO75223 188 aaKnown RBP10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 SRSF10O75494 262 aaKnown RBP10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 PNPP00491 289 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 CLPSP04118 112 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 H2BFMP0C1H6 154 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 MMP16P51512 607 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 SLC37A1P57057 533 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 MFGE8Q08431 387 aaPredicted RBP10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 SPOCK1Q08629 439 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 ZP4Q12836 540 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 ATXN7L3Q14CW9 347 aaPredicted RBP10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 VAX1Q5SQQ9 334 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 ASPHD2Q6ICH7 369 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 SPINK14Q6IE38 97 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 PRSS54Q6PEW0 395 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 CBLN3Q6UW01 205 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 CLEC9AQ6UXN8 241 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 KCTD9Q7L273 389 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 GRINAQ7Z429 371 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 HOGA1Q86XE5 327 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 MDS2Q8NDY4 140 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 OR5D14Q8NGL3 314 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 OR10J5Q8NHC4 309 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 PAQR8Q8TEZ7 354 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 CA5BP1Q8WTZ4 195 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 TMEM234Q8WY98 164 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 TBL1XR1Q9BZK7 514 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 MOB1AQ9H8S9 216 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 SH3BGRL2Q9UJC5 107 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 CLDN16Q9Y5I7 305 aa10.17□□□□□ -0.78
CHRNB1-202ENST00000536404 APCP25054 2843 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 TMED7-TICAM2A0A0A6YYA0 188 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 TMEM269A0A1B0GVZ9 245 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 A0A1W2PPE3 182 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 CEACAM18A8MTB9 384 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 EEF1E1-BLOC1S5C9J1V9 151 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 RAB27BO00194 218 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 PLPP3O14495 311 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 CCSO14618 274 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 NUDT14O95848 222 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 ACTL6AO96019 429 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 PGAM2P15259 253 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 TMEM11P17152 192 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 FGF7P21781 194 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 NFYBP25208 207 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 SERPINF1P36955 418 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 ECI1P42126 302 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 RPS27P42677 84 aaKnown RBP10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 CAV2P51636 162 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 OR2B8PP59922 312 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 ZNF117Q03924 483 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 KIAA0141Q14154 515 aaPredicted RBP10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 ARL6IP1Q15041 203 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 RHEBQ15382 184 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 OR1C1Q15619 314 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 PCK2Q16822 640 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 ZNF468Q5VIY5 522 aaPredicted RBP10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 C1orf140Q5VVS0 124 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 LYPD6Q86Y78 171 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 ACBD4Q8NC06 268 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 OR10R2Q8NGX6 335 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 CASTOR1Q8WTX7 329 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 MARS2Q96GW9 593 aaKnown RBP10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 POM121Q96HA1 1249 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 AQP10Q96PS8 301 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 CLCC1Q96S66 551 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 PIGQQ9BRB3 760 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 KCNK15Q9H427 330 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 LPAR3Q9UBY5 353 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 TMED7Q9Y3B3 224 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 EMC9Q9Y3B6 208 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 TIMM10BQ9Y5J6 103 aa10.16□□□□□ -0.78
CHRNB1-202ENST00000536404 C13orf42A0A1B0GVH6 325 aa10.15□□□□□ -0.78
CHRNB1-202ENST00000536404 CXorf65A6NEN9 183 aa10.15□□□□□ -0.78
CHRNB1-202ENST00000536404 OR6C76A6NM76 312 aa10.15□□□□□ -0.78
CHRNB1-202ENST00000536404 RPL36A-HNRNPH2H7BZ11 118 aa10.15□□□□□ -0.78
CHRNB1-202ENST00000536404 CCL21O00585 134 aa10.15□□□□□ -0.78
CHRNB1-202ENST00000536404 NPIPB7O75200 414 aa10.15□□□□□ -0.78
CHRNB1-202ENST00000536404 FARS2O95363 451 aaKnown RBP10.15□□□□□ -0.78
CHRNB1-202ENST00000536404 SFT2D2O95562 160 aa10.15□□□□□ -0.78
CHRNB1-202ENST00000536404 CSN2P05814 226 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms