RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 UBE2E1P51965 193 aa24.8■■□□□ 1.56
SSSCA1-207ENST00000533115 MTCP1P56278 107 aa24.8■■□□□ 1.56
SSSCA1-207ENST00000533115 MRPL28Q13084 256 aaKnown RBP24.8■■□□□ 1.56
SSSCA1-207ENST00000533115 SMN1Q16637 294 aaKnown RBP24.8■■□□□ 1.56
SSSCA1-207ENST00000533115 LRRC36Q1X8D7 754 aa24.8■■□□□ 1.56
SSSCA1-207ENST00000533115 FIP1L1Q6UN15 594 aaKnown RBP24.8■■□□□ 1.56
SSSCA1-207ENST00000533115 OR5D13Q8NGL4 314 aa24.8■■□□□ 1.56
SSSCA1-207ENST00000533115 SPSB1Q96BD6 273 aa24.8■■□□□ 1.56
SSSCA1-207ENST00000533115 A0A1W2PPH5 198 aa24.79■■□□□ 1.56
SSSCA1-207ENST00000533115 CHRM2P08172 466 aa24.79■■□□□ 1.56
SSSCA1-207ENST00000533115 IER3P46695 156 aa24.79■■□□□ 1.56
SSSCA1-207ENST00000533115 COL10A1Q03692 680 aa24.79■■□□□ 1.56
SSSCA1-207ENST00000533115 TMEM200BQ69YZ2 307 aa24.79■■□□□ 1.56
SSSCA1-207ENST00000533115 LHFPL2Q6ZUX7 228 aa24.79■■□□□ 1.56
SSSCA1-207ENST00000533115 MKXQ8IYA7 352 aa24.79■■□□□ 1.56
SSSCA1-207ENST00000533115 Q8IYB0 196 aa24.79■■□□□ 1.56
SSSCA1-207ENST00000533115 OR4M1Q8NGD0 313 aa24.79■■□□□ 1.56
SSSCA1-207ENST00000533115 ZNF747Q9BV97 191 aa24.79■■□□□ 1.56
SSSCA1-207ENST00000533115 C8orf4Q9NR00 106 aa24.79■■□□□ 1.56
SSSCA1-207ENST00000533115 E9PI62 339 aa24.78■■□□□ 1.56
SSSCA1-207ENST00000533115 K7N7A8 449 aa24.78■■□□□ 1.56
SSSCA1-207ENST00000533115 CYB5AP00167 134 aa24.78■■□□□ 1.56
SSSCA1-207ENST00000533115 RPSAP08865 295 aaKnown RBP24.78■■□□□ 1.56
SSSCA1-207ENST00000533115 FBP1P09467 338 aa24.78■■□□□ 1.56
SSSCA1-207ENST00000533115 GBX2P52951 348 aaPredicted RBP24.78■■□□□ 1.56
SSSCA1-207ENST00000533115 RCN1Q15293 331 aa24.78■■□□□ 1.56
SSSCA1-207ENST00000533115 ZNF691Q5VV52 312 aa24.78■■□□□ 1.56
SSSCA1-207ENST00000533115 PNKDQ8N490 385 aa24.78■■□□□ 1.56
SSSCA1-207ENST00000533115 PACRGLQ8N7B6 248 aa24.78■■□□□ 1.56
SSSCA1-207ENST00000533115 ASCC1Q8N9N2 400 aaKnown RBP24.78■■□□□ 1.56
SSSCA1-207ENST00000533115 EMG1Q92979 244 aaKnown RBP24.78■■□□□ 1.56
SSSCA1-207ENST00000533115 OPALINQ96PE5 141 aa24.78■■□□□ 1.56
SSSCA1-207ENST00000533115 JAM3Q9BX67 310 aa24.78■■□□□ 1.56
SSSCA1-207ENST00000533115 FGF20Q9NP95 211 aaPredicted RBP24.78■■□□□ 1.56
SSSCA1-207ENST00000533115 CLIC3O95833 236 aa24.77■■□□□ 1.56
SSSCA1-207ENST00000533115 IGHV4-59P01825 116 aa24.77■■□□□ 1.56
SSSCA1-207ENST00000533115 CRYBA1P05813 215 aa24.77■■□□□ 1.56
SSSCA1-207ENST00000533115 OCM2P0CE71 109 aa24.77■■□□□ 1.56
SSSCA1-207ENST00000533115 OCMP0CE72 109 aaPredicted RBP24.77■■□□□ 1.56
SSSCA1-207ENST00000533115 POU3F4P49335 361 aa24.77■■□□□ 1.56
SSSCA1-207ENST00000533115 HAVCR2Q8TDQ0 301 aa24.77■■□□□ 1.56
SSSCA1-207ENST00000533115 CYGBQ8WWM9 190 aa24.77■■□□□ 1.56
SSSCA1-207ENST00000533115 MEIOCA2RUB1 952 aa24.76■■□□□ 1.55
SSSCA1-207ENST00000533115 TMEM212A6NML5 194 aa24.76■■□□□ 1.55
SSSCA1-207ENST00000533115 ZFPL1O95159 310 aa24.76■■□□□ 1.55
SSSCA1-207ENST00000533115 MT-ND2P03891 347 aa24.76■■□□□ 1.55
SSSCA1-207ENST00000533115 CCDC159P0C7I6 412 aa24.76■■□□□ 1.55
SSSCA1-207ENST00000533115 LIMS3P0CW19 117 aa24.76■■□□□ 1.55
SSSCA1-207ENST00000533115 LIMS4P0CW20 117 aa24.76■■□□□ 1.55
SSSCA1-207ENST00000533115 NPBWR2P48146 333 aa24.76■■□□□ 1.55
SSSCA1-207ENST00000533115 ACSM1Q08AH1 577 aa24.76■■□□□ 1.55
SSSCA1-207ENST00000533115 TTC23Q5W5X9 447 aa24.76■■□□□ 1.55
SSSCA1-207ENST00000533115 HCP5Q6MZN7 132 aa24.76■■□□□ 1.55
SSSCA1-207ENST00000533115 OR13C9Q8NGT0 318 aa24.76■■□□□ 1.55
SSSCA1-207ENST00000533115 OR5AK2Q8NH90 309 aa24.76■■□□□ 1.55
SSSCA1-207ENST00000533115 CNIH3Q8TBE1 160 aa24.76■■□□□ 1.55
SSSCA1-207ENST00000533115 COMMD4Q9H0A8 199 aa24.76■■□□□ 1.55
SSSCA1-207ENST00000533115 DPAGT1Q9H3H5 408 aa24.76■■□□□ 1.55
SSSCA1-207ENST00000533115 ZNRD1Q9P1U0 126 aa24.76■■□□□ 1.55
SSSCA1-207ENST00000533115 SF3B6Q9Y3B4 125 aaKnown RBP24.76■■□□□ 1.55
SSSCA1-207ENST00000533115 ZNF737O75373 536 aa24.75■■□□□ 1.55
SSSCA1-207ENST00000533115 BCL3P20749 454 aa24.75■■□□□ 1.55
SSSCA1-207ENST00000533115 OMGP23515 440 aa24.75■■□□□ 1.55
SSSCA1-207ENST00000533115 PEX2P28328 305 aa24.75■■□□□ 1.55
SSSCA1-207ENST00000533115 SAA4P35542 130 aa24.75■■□□□ 1.55
SSSCA1-207ENST00000533115 PDZK1IP1Q13113 114 aa24.75■■□□□ 1.55
SSSCA1-207ENST00000533115 DYRK2Q92630 601 aa24.75■■□□□ 1.55
SSSCA1-207ENST00000533115 PDCD1LG2Q9BQ51 273 aa24.75■■□□□ 1.55
SSSCA1-207ENST00000533115 ZCCHC4Q9H5U6 513 aa24.75■■□□□ 1.55
SSSCA1-207ENST00000533115 SEBOXQ9HB31 216 aaPredicted RBP24.75■■□□□ 1.55
SSSCA1-207ENST00000533115 RBFOX1Q9NWB1 397 aaKnown RBP24.75■■□□□ 1.55
SSSCA1-207ENST00000533115 TRBV2A0A0J9YWF9 115 aa24.74■■□□□ 1.55
SSSCA1-207ENST00000533115 POM121CA8CG34 1229 aa24.74■■□□□ 1.55
SSSCA1-207ENST00000533115 SPRY1O43609 319 aaPredicted RBP24.74■■□□□ 1.55
SSSCA1-207ENST00000533115 MDKP21741 143 aaPredicted RBP24.74■■□□□ 1.55
SSSCA1-207ENST00000533115 DCKP27707 260 aa24.74■■□□□ 1.55
SSSCA1-207ENST00000533115 ZNF273Q14593 569 aa24.74■■□□□ 1.55
SSSCA1-207ENST00000533115 FAM58AQ8N1B3 248 aa24.74■■□□□ 1.55
SSSCA1-207ENST00000533115 C11orf42Q8N5U0 333 aa24.74■■□□□ 1.55
SSSCA1-207ENST00000533115 RFT1Q96AA3 541 aa24.74■■□□□ 1.55
SSSCA1-207ENST00000533115 IL36RNQ9UBH0 155 aa24.74■■□□□ 1.55
SSSCA1-207ENST00000533115 NBEAL1Q6ZS30 2694 aa24.74■■□□□ 1.55
SSSCA1-207ENST00000533115 hCG_1809904A0A1W2PP81 198 aa24.73■■□□□ 1.55
SSSCA1-207ENST00000533115 A0A1W2PPE2 198 aa24.73■■□□□ 1.55
SSSCA1-207ENST00000533115 A0A1W2PR64 198 aa24.73■■□□□ 1.55
SSSCA1-207ENST00000533115 A0A1W2PRV1 198 aa24.73■■□□□ 1.55
SSSCA1-207ENST00000533115 ANGPTL7O43827 346 aa24.73■■□□□ 1.55
SSSCA1-207ENST00000533115 HAND1O96004 215 aa24.73■■□□□ 1.55
SSSCA1-207ENST00000533115 PAHP00439 452 aa24.73■■□□□ 1.55
SSSCA1-207ENST00000533115 PIPP12273 146 aaPredicted RBP24.73■■□□□ 1.55
SSSCA1-207ENST00000533115 CCL3L1P16619 93 aa24.73■■□□□ 1.55
SSSCA1-207ENST00000533115 RPL15P61313 204 aaKnown RBP24.73■■□□□ 1.55
SSSCA1-207ENST00000533115 SHISA2Q6UWI4 295 aa24.73■■□□□ 1.55
SSSCA1-207ENST00000533115 SNX22Q96L94 193 aa24.73■■□□□ 1.55
SSSCA1-207ENST00000533115 SPACA5Q96QH8 159 aa24.73■■□□□ 1.55
SSSCA1-207ENST00000533115 NEK6Q9HC98 313 aa24.73■■□□□ 1.55
SSSCA1-207ENST00000533115 C1RLQ9NZP8 487 aa24.73■■□□□ 1.55
SSSCA1-207ENST00000533115 DHDHQ9UQ10 334 aa24.73■■□□□ 1.55
SSSCA1-207ENST00000533115 MMP24Q9Y5R2 645 aa24.73■■□□□ 1.55
SSSCA1-207ENST00000533115 IRGMA1A4Y4 181 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms