RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 SLAMF9Q96A28 289 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 ADAT3Q96EY9 351 aaPredicted RBP14.11□□□□□ -0.15
PHRF1-204ENST00000532550 PELI1Q96FA3 418 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 ALG8Q9BVK2 526 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 BEX1Q9HBH7 125 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 HHLA2Q9UM44 414 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 MYRFQ9Y2G1 1151 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 RPL36Q9Y3U8 105 aaKnown RBP14.11□□□□□ -0.15
PHRF1-204ENST00000532550 MMP24Q9Y5R2 645 aa14.11□□□□□ -0.15
PHRF1-204ENST00000532550 BTBD17A6NE02 478 aa14.1□□□□□ -0.15
PHRF1-204ENST00000532550 ATF1P18846 271 aa14.1□□□□□ -0.15
PHRF1-204ENST00000532550 RPL15P61313 204 aaKnown RBP14.1□□□□□ -0.15
PHRF1-204ENST00000532550 COL10A1Q03692 680 aa14.1□□□□□ -0.15
PHRF1-204ENST00000532550 ACSM1Q08AH1 577 aa14.1□□□□□ -0.15
PHRF1-204ENST00000532550 RAB40BQ12829 278 aa14.1□□□□□ -0.15
PHRF1-204ENST00000532550 ALKBH1Q13686 389 aaKnown RBP14.1□□□□□ -0.15
PHRF1-204ENST00000532550 KLHL22Q53GT1 634 aa14.1□□□□□ -0.15
PHRF1-204ENST00000532550 SYS1Q8N2H4 156 aa14.1□□□□□ -0.15
PHRF1-204ENST00000532550 ASCC1Q8N9N2 400 aaKnown RBP14.1□□□□□ -0.15
PHRF1-204ENST00000532550 HEXA-AS1Q9H8Q6 139 aa14.1□□□□□ -0.15
PHRF1-204ENST00000532550 INPP5EQ9NRR6 644 aa14.1□□□□□ -0.15
PHRF1-204ENST00000532550 C1RLQ9NZP8 487 aa14.1□□□□□ -0.15
PHRF1-204ENST00000532550 F8VVB4 439 aa14.09□□□□□ -0.15
PHRF1-204ENST00000532550 F8VWA3 439 aa14.09□□□□□ -0.15
PHRF1-204ENST00000532550 K7N7A8 449 aa14.09□□□□□ -0.15
PHRF1-204ENST00000532550 ANGPTL7O43827 346 aa14.09□□□□□ -0.15
PHRF1-204ENST00000532550 RPSAP08865 295 aaKnown RBP14.09□□□□□ -0.15
PHRF1-204ENST00000532550 AZGP1P25311 298 aaKnown RBP14.09□□□□□ -0.15
PHRF1-204ENST00000532550 SAA4P35542 130 aa14.09□□□□□ -0.15
PHRF1-204ENST00000532550 RAG2P55895 527 aa14.09□□□□□ -0.15
PHRF1-204ENST00000532550 MRPL28Q13084 256 aaKnown RBP14.09□□□□□ -0.15
PHRF1-204ENST00000532550 ZSCAN26Q16670 478 aa14.09□□□□□ -0.15
PHRF1-204ENST00000532550 GDPGP1Q6ZNW5 385 aa14.09□□□□□ -0.15
PHRF1-204ENST00000532550 LHFPL2Q6ZUX7 228 aa14.09□□□□□ -0.15
PHRF1-204ENST00000532550 Q8IYB0 196 aa14.09□□□□□ -0.15
PHRF1-204ENST00000532550 PNKDQ8N490 385 aa14.09□□□□□ -0.15
PHRF1-204ENST00000532550 OR13C3Q8NGS6 347 aa14.09□□□□□ -0.15
PHRF1-204ENST00000532550 EMG1Q92979 244 aaKnown RBP14.09□□□□□ -0.15
PHRF1-204ENST00000532550 RDH12Q96NR8 316 aa14.09□□□□□ -0.15
PHRF1-204ENST00000532550 SLITRK2Q9H156 845 aa14.09□□□□□ -0.15
PHRF1-204ENST00000532550 ISG20L2Q9H9L3 353 aaKnown RBP14.09□□□□□ -0.15
PHRF1-204ENST00000532550 NEK6Q9HC98 313 aa14.09□□□□□ -0.15
PHRF1-204ENST00000532550 ERVK13-1Q9NX77 482 aa14.09□□□□□ -0.15
PHRF1-204ENST00000532550 SMPD3Q9NY59 655 aaPredicted RBP14.09□□□□□ -0.15
PHRF1-204ENST00000532550 ZNRD1Q9P1U0 126 aa14.09□□□□□ -0.15
PHRF1-204ENST00000532550 IGKV1-9A0A0C4DH69 117 aa14.08□□□□□ -0.16
PHRF1-204ENST00000532550 OR4C45A6NMZ5 311 aa14.08□□□□□ -0.16
PHRF1-204ENST00000532550 GPR137BO60478 399 aa14.08□□□□□ -0.16
PHRF1-204ENST00000532550 NDUFA7O95182 113 aa14.08□□□□□ -0.16
PHRF1-204ENST00000532550 IGHA1P01876 353 aa14.08□□□□□ -0.16
PHRF1-204ENST00000532550 POU3F4P49335 361 aa14.08□□□□□ -0.16
PHRF1-204ENST00000532550 GBX2P52951 348 aaPredicted RBP14.08□□□□□ -0.16
PHRF1-204ENST00000532550 GDPD3Q7L5L3 318 aa14.08□□□□□ -0.16
PHRF1-204ENST00000532550 OR52I1Q8NGK6 324 aa14.08□□□□□ -0.16
PHRF1-204ENST00000532550 SPSB1Q96BD6 273 aa14.08□□□□□ -0.16
PHRF1-204ENST00000532550 SNX22Q96L94 193 aa14.08□□□□□ -0.16
PHRF1-204ENST00000532550 MRPS18AQ9NVS2 196 aaKnown RBP14.08□□□□□ -0.16
PHRF1-204ENST00000532550 GLS2Q9UI32 602 aa14.08□□□□□ -0.16
PHRF1-204ENST00000532550 PIPP12273 146 aaPredicted RBP14.07□□□□□ -0.16
PHRF1-204ENST00000532550 NPBWR2P48146 333 aa14.07□□□□□ -0.16
PHRF1-204ENST00000532550 EDDM3BP56851 147 aa14.07□□□□□ -0.16
PHRF1-204ENST00000532550 RELBQ01201 579 aa14.07□□□□□ -0.16
PHRF1-204ENST00000532550 MIDNQ504T8 468 aa14.07□□□□□ -0.16
PHRF1-204ENST00000532550 LPCAT4Q643R3 524 aa14.07□□□□□ -0.16
PHRF1-204ENST00000532550 HCP5Q6MZN7 132 aa14.07□□□□□ -0.16
PHRF1-204ENST00000532550 FAM58AQ8N1B3 248 aa14.07□□□□□ -0.16
PHRF1-204ENST00000532550 OR51A4Q8NGJ6 313 aa14.07□□□□□ -0.16
PHRF1-204ENST00000532550 OR10AC1Q8NH08 325 aa14.07□□□□□ -0.16
PHRF1-204ENST00000532550 OPALINQ96PE5 141 aa14.07□□□□□ -0.16
PHRF1-204ENST00000532550 COMMD4Q9H0A8 199 aa14.07□□□□□ -0.16
PHRF1-204ENST00000532550 SEBOXQ9HB31 216 aaPredicted RBP14.07□□□□□ -0.16
PHRF1-204ENST00000532550 CLPSL1A2RUU4 121 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 TMEM212A6NML5 194 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 SPRY1O43609 319 aaPredicted RBP14.06□□□□□ -0.16
PHRF1-204ENST00000532550 ZNF737O75373 536 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 CCDC159P0C7I6 412 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 CCL3L1P16619 93 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 BCL3P20749 454 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 LGALS4P56470 323 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 ERVFRD-1P60508 538 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 PDZK1IP1Q13113 114 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 ZNF273Q14593 569 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 TAF9Q16594 264 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 LRRC36Q1X8D7 754 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 OLFML2AQ68BL7 652 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 C17orf107Q6ZR85 190 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 SERPINA12Q8IW75 414 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 C11orf42Q8N5U0 333 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 ZSCAN4Q8NAM6 433 aaPredicted RBP14.06□□□□□ -0.16
PHRF1-204ENST00000532550 BEND2Q8NDZ0 799 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 OR5D14Q8NGL3 314 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 OR13C9Q8NGT0 318 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 OR5R1Q8NH85 324 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 OR5AK2Q8NH90 309 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 HAVCR2Q8TDQ0 301 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 APH1BQ8WW43 257 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 ZNF649Q9BS31 505 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 ZCCHC4Q9H5U6 513 aa14.06□□□□□ -0.16
PHRF1-204ENST00000532550 RBFOX1Q9NWB1 397 aaKnown RBP14.06□□□□□ -0.16
PHRF1-204ENST00000532550 TRBV2A0A0J9YWF9 115 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms