RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 FOXJ3Q9UPW0 622 aa12.78□□□□□ -0.36
CPSF1-205ENST00000531042 GATBO75879 557 aaKnown RBP12.77□□□□□ -0.37
CPSF1-205ENST00000531042 RBP4P02753 201 aa12.77□□□□□ -0.37
CPSF1-205ENST00000531042 ZNF728P0DKX0 622 aa12.77□□□□□ -0.37
CPSF1-205ENST00000531042 FCGR1AP12314 374 aa12.77□□□□□ -0.37
CPSF1-205ENST00000531042 EDDM3BP56851 147 aa12.77□□□□□ -0.37
CPSF1-205ENST00000531042 C1orf146Q5VVC0 180 aa12.77□□□□□ -0.37
CPSF1-205ENST00000531042 GDPD3Q7L5L3 318 aa12.77□□□□□ -0.37
CPSF1-205ENST00000531042 PRSS35Q8N3Z0 413 aa12.77□□□□□ -0.37
CPSF1-205ENST00000531042 KLHDC1Q8N7A1 406 aa12.77□□□□□ -0.37
CPSF1-205ENST00000531042 DTX3Q8N9I9 347 aa12.77□□□□□ -0.37
CPSF1-205ENST00000531042 CCDC54Q8NEL0 328 aa12.77□□□□□ -0.37
CPSF1-205ENST00000531042 OR10H4Q8NGA5 316 aa12.77□□□□□ -0.37
CPSF1-205ENST00000531042 OR13D1Q8NGV5 346 aa12.77□□□□□ -0.37
CPSF1-205ENST00000531042 SLAMF9Q96A28 289 aa12.77□□□□□ -0.37
CPSF1-205ENST00000531042 ADI1Q9BV57 179 aa12.77□□□□□ -0.37
CPSF1-205ENST00000531042 GABARAPL3Q9BY60 117 aa12.77□□□□□ -0.37
CPSF1-205ENST00000531042 NPFFR1Q9GZQ6 430 aa12.77□□□□□ -0.37
CPSF1-205ENST00000531042 CHST5Q9GZS9 411 aa12.77□□□□□ -0.37
CPSF1-205ENST00000531042 TBL2Q9Y4P3 447 aaKnown RBP12.77□□□□□ -0.37
CPSF1-205ENST00000531042 MEX3AA1L020 520 aaKnown RBP12.76□□□□□ -0.37
CPSF1-205ENST00000531042 ODF3BA8MYP8 253 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 INMTO95050 263 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 SERPINA3P01011 423 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 ARG1P05089 322 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 IGHV1-8P0DP01 117 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 ATP6V1E1P36543 226 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 RASSF2P50749 326 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 RAB13P51153 203 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 TMED1Q13445 227 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 PLA1AQ53H76 456 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 LDLRAD2Q5SZI1 272 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 HIST2H2BDQ6DRA6 164 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 SLC25A26Q70HW3 274 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 TCF23Q7RTU1 214 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 EGFL6Q8IUX8 553 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 OR8H2Q8N162 312 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 C11orf44Q8N8P7 122 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 OR11H6Q8NGC7 330 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 OR8J1Q8NGP2 316 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 EME1Q96AY2 570 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 C10orf35Q96D05 121 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 MALSU1Q96EH3 234 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 BORCS8Q96FH0 119 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 SNX22Q96L94 193 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 RIBC2Q9H4K1 309 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 OAZ3Q9UMX2 235 aa12.76□□□□□ -0.37
CPSF1-205ENST00000531042 A0A0G2JK05 382 aa12.75□□□□□ -0.37
CPSF1-205ENST00000531042 LOC107986453A0A1B0GWG9 222 aa12.75□□□□□ -0.37
CPSF1-205ENST00000531042 TMEM82A0PJX8 343 aa12.75□□□□□ -0.37
CPSF1-205ENST00000531042 KIR3DL2P43630 455 aa12.75□□□□□ -0.37
CPSF1-205ENST00000531042 ISL1P61371 349 aa12.75□□□□□ -0.37
CPSF1-205ENST00000531042 ZNF85Q03923 595 aa12.75□□□□□ -0.37
CPSF1-205ENST00000531042 MEF2CQ06413 473 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-205ENST00000531042 CNN3Q15417 329 aaKnown RBP12.75□□□□□ -0.37
CPSF1-205ENST00000531042 FAM189A2Q15884 450 aa12.75□□□□□ -0.37
CPSF1-205ENST00000531042 ZNF626Q68DY1 528 aa12.75□□□□□ -0.37
CPSF1-205ENST00000531042 CCBE1Q6UXH8 406 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-205ENST00000531042 RDH10Q8IZV5 341 aa12.75□□□□□ -0.37
CPSF1-205ENST00000531042 PP6455Q8WZ26 134 aa12.75□□□□□ -0.37
CPSF1-205ENST00000531042 RFKQ969G6 155 aa12.75□□□□□ -0.37
CPSF1-205ENST00000531042 RNF166Q96A37 237 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-205ENST00000531042 FOXRED1Q96CU9 486 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-205ENST00000531042 CENPNQ96H22 339 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-205ENST00000531042 NKX3-1Q99801 234 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-205ENST00000531042 CDCA4Q9BXL8 241 aa12.75□□□□□ -0.37
CPSF1-205ENST00000531042 SEBOXQ9HB31 216 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-205ENST00000531042 GNG8Q9UK08 70 aa12.75□□□□□ -0.37
CPSF1-205ENST00000531042 TCF19Q9Y242 345 aa12.75□□□□□ -0.37
CPSF1-205ENST00000531042 A6NDX4 124 aa12.74□□□□□ -0.37
CPSF1-205ENST00000531042 HAND1O96004 215 aa12.74□□□□□ -0.37
CPSF1-205ENST00000531042 OPN1MWP04001 364 aa12.74□□□□□ -0.37
CPSF1-205ENST00000531042 UBCP0CG48 685 aaKnown RBP12.74□□□□□ -0.37
CPSF1-205ENST00000531042 OPN1MW2P0DN77 364 aa12.74□□□□□ -0.37
CPSF1-205ENST00000531042 OPN1MW3P0DN78 364 aa12.74□□□□□ -0.37
CPSF1-205ENST00000531042 VSIG10L2P0DP72 767 aa12.74□□□□□ -0.37
CPSF1-205ENST00000531042 EDDM3AQ14507 147 aa12.74□□□□□ -0.37
CPSF1-205ENST00000531042 SSX2Q16385 188 aa12.74□□□□□ -0.37
CPSF1-205ENST00000531042 TP53I3Q53FA7 332 aa12.74□□□□□ -0.37
CPSF1-205ENST00000531042 FAM220AQ7Z4H9 259 aa12.74□□□□□ -0.37
CPSF1-205ENST00000531042 Q8IYB0 196 aa12.74□□□□□ -0.37
CPSF1-205ENST00000531042 ENTHD1Q8IYW4 607 aa12.74□□□□□ -0.37
CPSF1-205ENST00000531042 DNAAF1Q8NEP3 725 aa12.74□□□□□ -0.37
CPSF1-205ENST00000531042 RPS4Y2Q8TD47 263 aa12.74□□□□□ -0.37
CPSF1-205ENST00000531042 EMG1Q92979 244 aaKnown RBP12.74□□□□□ -0.37
CPSF1-205ENST00000531042 ZNF714Q96N38 554 aa12.74□□□□□ -0.37
CPSF1-205ENST00000531042 OSBPL10Q9BXB5 764 aa12.74□□□□□ -0.37
CPSF1-205ENST00000531042 ZNF702PQ9H963 129 aa12.74□□□□□ -0.37
CPSF1-205ENST00000531042 ABCB10Q9NRK6 738 aa12.74□□□□□ -0.37
CPSF1-205ENST00000531042 SERTAD4Q9NUC0 356 aa12.74□□□□□ -0.37
CPSF1-205ENST00000531042 IL36RNQ9UBH0 155 aa12.74□□□□□ -0.37
CPSF1-205ENST00000531042 IGKV1-9A0A0C4DH69 117 aa12.73□□□□□ -0.37
CPSF1-205ENST00000531042 hADV38S2A0JD32 116 aa12.73□□□□□ -0.37
CPSF1-205ENST00000531042 ATP5HO75947 161 aa12.73□□□□□ -0.37
CPSF1-205ENST00000531042 IGHA1P01876 353 aa12.73□□□□□ -0.37
CPSF1-205ENST00000531042 PEX2P28328 305 aa12.73□□□□□ -0.37
CPSF1-205ENST00000531042 NPBWR2P48146 333 aa12.73□□□□□ -0.37
CPSF1-205ENST00000531042 RBP2P50120 134 aa12.73□□□□□ -0.37
CPSF1-205ENST00000531042 ATP1B3P54709 279 aa12.73□□□□□ -0.37
CPSF1-205ENST00000531042 ZNF91Q05481 1191 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms