RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 TBPL1P62380 186 aa2.54□□□□□ -2
CD44-229ENST00000528672 GNG3P63215 75 aa2.54□□□□□ -2
CD44-229ENST00000528672 EMX1Q04741 257 aaPredicted RBP2.54□□□□□ -2
CD44-229ENST00000528672 TWF1Q12792 350 aa2.54□□□□□ -2
CD44-229ENST00000528672 RUNX3Q13761 415 aa2.54□□□□□ -2
CD44-229ENST00000528672 KIR2DS1Q14954 304 aa2.54□□□□□ -2
CD44-229ENST00000528672 FCN2Q15485 313 aa2.54□□□□□ -2
CD44-229ENST00000528672 SURF2Q15527 256 aaPredicted RBP2.54□□□□□ -2
CD44-229ENST00000528672 TGIF1Q15583 401 aa2.54□□□□□ -2
CD44-229ENST00000528672 TSNQ15631 228 aaKnown RBP2.54□□□□□ -2
CD44-229ENST00000528672 NSUN5P1Q3KNT7 163 aa2.54□□□□□ -2
CD44-229ENST00000528672 GPRC6AQ5T6X5 926 aa2.54□□□□□ -2
CD44-229ENST00000528672 FAM71E1Q6IPT2 247 aa2.54□□□□□ -2
CD44-229ENST00000528672 NANOGP8Q6NSW7 305 aa2.54□□□□□ -2
CD44-229ENST00000528672 C2orf66Q6UXQ4 117 aa2.54□□□□□ -2
CD44-229ENST00000528672 BAIAP2L2Q6UXY1 529 aa2.54□□□□□ -2
CD44-229ENST00000528672 GLT6D1Q7Z4J2 308 aa2.54□□□□□ -2
CD44-229ENST00000528672 GALNT10Q86SR1 603 aa2.54□□□□□ -2
CD44-229ENST00000528672 SLC25A42Q86VD7 318 aa2.54□□□□□ -2
CD44-229ENST00000528672 COMMD7Q86VX2 200 aa2.54□□□□□ -2
CD44-229ENST00000528672 Q8N377 158 aa2.54□□□□□ -2
CD44-229ENST00000528672 C9orf62Q8N4C0 152 aa2.54□□□□□ -2
CD44-229ENST00000528672 ZNF676Q8N7Q3 588 aa2.54□□□□□ -2
CD44-229ENST00000528672 ACOT4Q8N9L9 421 aa2.54□□□□□ -2
CD44-229ENST00000528672 OR6K2Q8NGY2 324 aa2.54□□□□□ -2
CD44-229ENST00000528672 OR6N1Q8NGY5 312 aa2.54□□□□□ -2
CD44-229ENST00000528672 OR8U1Q8NH10 309 aa2.54□□□□□ -2
CD44-229ENST00000528672 ZFP90Q8TF47 636 aa2.54□□□□□ -2
CD44-229ENST00000528672 Q8WTZ3 238 aa2.54□□□□□ -2
CD44-229ENST00000528672 DCAKDQ8WVC6 231 aa2.54□□□□□ -2
CD44-229ENST00000528672 SMIM19Q96E16 107 aa2.54□□□□□ -2
CD44-229ENST00000528672 CCDC126Q96EE4 140 aa2.54□□□□□ -2
CD44-229ENST00000528672 CENPNQ96H22 339 aaPredicted RBP2.54□□□□□ -2
CD44-229ENST00000528672 ITCHQ96J02 903 aa2.54□□□□□ -2
CD44-229ENST00000528672 PGLYRP4Q96LB8 373 aa2.54□□□□□ -2
CD44-229ENST00000528672 KCTD7Q96MP8 289 aa2.54□□□□□ -2
CD44-229ENST00000528672 DOK1Q99704 481 aa2.54□□□□□ -2
CD44-229ENST00000528672 ATP5SQ99766 215 aa2.54□□□□□ -2
CD44-229ENST00000528672 MRPL45Q9BRJ2 306 aaKnown RBP2.54□□□□□ -2
CD44-229ENST00000528672 CCDC32Q9BV29 185 aa2.54□□□□□ -2
CD44-229ENST00000528672 DEFB129Q9H1M3 183 aa2.54□□□□□ -2
CD44-229ENST00000528672 DCSTAMPQ9H295 470 aa2.54□□□□□ -2
CD44-229ENST00000528672 TXNIPQ9H3M7 391 aa2.54□□□□□ -2
CD44-229ENST00000528672 CLMPQ9H6B4 373 aa2.54□□□□□ -2
CD44-229ENST00000528672 CLN6Q9NWW5 311 aa2.54□□□□□ -2
CD44-229ENST00000528672 TAS2R13Q9NYV9 303 aa2.54□□□□□ -2
CD44-229ENST00000528672 IL17CQ9P0M4 197 aa2.54□□□□□ -2
CD44-229ENST00000528672 COPZ2Q9P299 210 aa2.54□□□□□ -2
CD44-229ENST00000528672 B4GALT7Q9UBV7 327 aa2.54□□□□□ -2
CD44-229ENST00000528672 SS18L2Q9UHA2 77 aa2.54□□□□□ -2
CD44-229ENST00000528672 UBQLN1Q9UMX0 589 aaKnown RBP2.54□□□□□ -2
CD44-229ENST00000528672 PSG8Q9UQ74 426 aa2.54□□□□□ -2
CD44-229ENST00000528672 BAIAP2Q9UQB8 552 aa2.54□□□□□ -2
CD44-229ENST00000528672 YARS2Q9Y2Z4 477 aaKnown RBP2.54□□□□□ -2
CD44-229ENST00000528672 SIGLEC9Q9Y336 463 aa2.54□□□□□ -2
CD44-229ENST00000528672 UGT2A1Q9Y4X1 527 aa2.54□□□□□ -2
CD44-229ENST00000528672 RBM7Q9Y580 266 aaKnown RBP2.54□□□□□ -2
CD44-229ENST00000528672 CHD5Q8TDI0 1954 aa2.54□□□□□ -2
CD44-229ENST00000528672 TINCRA0A1B0GVN0 87 aa2.53□□□□□ -2
CD44-229ENST00000528672 CLDN24A6NM45 220 aa2.53□□□□□ -2
CD44-229ENST00000528672 I3L521 148 aa2.53□□□□□ -2
CD44-229ENST00000528672 SIRPB1O00241 398 aa2.53□□□□□ -2
CD44-229ENST00000528672 MRASO14807 208 aa2.53□□□□□ -2
CD44-229ENST00000528672 ERI3O43414 337 aaKnown RBP2.53□□□□□ -2
CD44-229ENST00000528672 SOX15O60248 233 aa2.53□□□□□ -2
CD44-229ENST00000528672 TPST1O60507 370 aa2.53□□□□□ -2
CD44-229ENST00000528672 ENTPD6O75354 484 aa2.53□□□□□ -2
CD44-229ENST00000528672 LYPLA1O75608 230 aaPredicted RBP2.53□□□□□ -2
CD44-229ENST00000528672 DUSP14O95147 198 aaKnown RBP2.53□□□□□ -2
CD44-229ENST00000528672 IFNA1P01562 189 aa2.53□□□□□ -2
CD44-229ENST00000528672 IGHV3-13P01766 116 aa2.53□□□□□ -2
CD44-229ENST00000528672 TYMSP04818 313 aa2.53□□□□□ -2
CD44-229ENST00000528672 SERPINA7P05543 415 aa2.53□□□□□ -2
CD44-229ENST00000528672 HIST1H1BP16401 226 aaKnown RBP2.53□□□□□ -2
CD44-229ENST00000528672 SLC2A5P22732 501 aa2.53□□□□□ -2
CD44-229ENST00000528672 AK4P27144 223 aaPredicted RBP2.53□□□□□ -2
CD44-229ENST00000528672 GLP1RP43220 463 aa2.53□□□□□ -2
CD44-229ENST00000528672 KIR2DS4P43632 304 aa2.53□□□□□ -2
CD44-229ENST00000528672 STC1P52823 247 aa2.53□□□□□ -2
CD44-229ENST00000528672 FBXW4P57775 412 aa2.53□□□□□ -2
CD44-229ENST00000528672 RPL26P61254 145 aaKnown RBP2.53□□□□□ -2
CD44-229ENST00000528672 COPZ1P61923 177 aa2.53□□□□□ -2
CD44-229ENST00000528672 LMO4P61968 165 aa2.53□□□□□ -2
CD44-229ENST00000528672 GNGT1P63211 74 aa2.53□□□□□ -2
CD44-229ENST00000528672 PRKCDQ05655 676 aa2.53□□□□□ -2
CD44-229ENST00000528672 ECH1Q13011 328 aa2.53□□□□□ -2
CD44-229ENST00000528672 OR2F1Q13607 317 aa2.53□□□□□ -2
CD44-229ENST00000528672 TAL2Q16559 108 aa2.53□□□□□ -2
CD44-229ENST00000528672 ZNF239Q16600 458 aaKnown RBP2.53□□□□□ -2
CD44-229ENST00000528672 TBC1D28Q2M2D7 210 aa2.53□□□□□ -2
CD44-229ENST00000528672 ARHGAP11BQ3KRB8 267 aa2.53□□□□□ -2
CD44-229ENST00000528672 PARP15Q460N3 678 aa2.53□□□□□ -2
CD44-229ENST00000528672 PYCR3Q53H96 274 aa2.53□□□□□ -2
CD44-229ENST00000528672 TMEM128Q5BJH2 165 aa2.53□□□□□ -2
CD44-229ENST00000528672 OR10J3Q5JRS4 329 aa2.53□□□□□ -2
CD44-229ENST00000528672 SOHLH1Q5JUK2 328 aa2.53□□□□□ -2
CD44-229ENST00000528672 ATAD3CQ5T2N8 411 aa2.53□□□□□ -2
CD44-229ENST00000528672 HENMT1Q5T8I9 393 aaKnown RBP2.53□□□□□ -2
CD44-229ENST00000528672 FAM78BQ5VT40 261 aa2.53□□□□□ -2
CD44-229ENST00000528672 ZNF343Q6P1L6 599 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms