RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 NCR3LG1Q68D85 454 aa12.73□□□□□ -0.37
CAPN1-213ENST00000527897 FDX2Q6P4F2 183 aa12.73□□□□□ -0.37
CAPN1-213ENST00000527897 METAP1DQ6UB28 335 aaPredicted RBP12.73□□□□□ -0.37
CAPN1-213ENST00000527897 OR52I1Q8NGK6 324 aa12.73□□□□□ -0.37
CAPN1-213ENST00000527897 SPACA5Q96QH8 159 aa12.73□□□□□ -0.37
CAPN1-213ENST00000527897 ERVK13-1Q9NX77 482 aa12.73□□□□□ -0.37
CAPN1-213ENST00000527897 IGKV1-9A0A0C4DH69 117 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 A0A1W2PPH5 198 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 OR4C45A6NMZ5 311 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 SPRY1O43609 319 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-213ENST00000527897 IGHA1P01876 353 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 ISG15P05161 165 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 CCL3L1P16619 93 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 PRKACBP22694 351 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 SAA4P35542 130 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 CCR9P51686 369 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 EDDM3BP56851 147 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 RAB40BQ12829 278 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 RCN1Q15293 331 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 KLHL22Q53GT1 634 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 TMEM200BQ69YZ2 307 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 C1orf122Q6ZSJ8 110 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 MKXQ8IYA7 352 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 TMEM86BQ8N661 226 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 OR5D13Q8NGL4 314 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 OR13C9Q8NGT0 318 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 CNIH3Q8TBE1 160 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 APH1BQ8WW43 257 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 TNFRSF14Q92956 283 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 NEK6Q9HC98 313 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 RBFOX1Q9NWB1 397 aaKnown RBP12.72□□□□□ -0.37
CAPN1-213ENST00000527897 IL36RNQ9UBH0 155 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 POMT1Q9Y6A1 747 aa12.72□□□□□ -0.37
CAPN1-213ENST00000527897 BTBD17A6NE02 478 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 ANKRD65E5RJM6 399 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 E9PI62 339 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 CHRM2P08172 466 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 BCL3P20749 454 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 COX7A1P24310 79 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 DUSP1P28562 367 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 IER3P46695 156 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 UBE2E1P51965 193 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 GBX2P52951 348 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-213ENST00000527897 RAG2P55895 527 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 ERVFRD-1P60508 538 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 EDDM3AQ14507 147 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 ZNF273Q14593 569 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 LHFPL2Q6ZUX7 228 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 GDPD3Q7L5L3 318 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 SYS1Q8N2H4 156 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 DNAAF1Q8NEP3 725 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 OR5D18Q8NGL1 313 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 OR5AK2Q8NH90 309 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 TSEN15Q8WW01 171 aaKnown RBP12.71□□□□□ -0.37
CAPN1-213ENST00000527897 RDH12Q96NR8 316 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 OPALINQ96PE5 141 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 PDCD1LG2Q9BQ51 273 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 ZNF747Q9BV97 191 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 COMMD4Q9H0A8 199 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 DPAGT1Q9H3H5 408 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 INPP5EQ9NRR6 644 aa12.71□□□□□ -0.37
CAPN1-213ENST00000527897 SF3B6Q9Y3B4 125 aaKnown RBP12.71□□□□□ -0.37
CAPN1-213ENST00000527897 NBEAL1Q6ZS30 2694 aa12.7□□□□□ -0.38
CAPN1-213ENST00000527897 hCG_1809904A0A1W2PP81 198 aa12.7□□□□□ -0.38
CAPN1-213ENST00000527897 A0A1W2PPE2 198 aa12.7□□□□□ -0.38
CAPN1-213ENST00000527897 A0A1W2PR64 198 aa12.7□□□□□ -0.38
CAPN1-213ENST00000527897 A0A1W2PRV1 198 aa12.7□□□□□ -0.38
CAPN1-213ENST00000527897 K7N7A8 449 aa12.7□□□□□ -0.38
CAPN1-213ENST00000527897 GPR137BO60478 399 aa12.7□□□□□ -0.38
CAPN1-213ENST00000527897 HAND1O96004 215 aa12.7□□□□□ -0.38
CAPN1-213ENST00000527897 HCKP08631 526 aa12.7□□□□□ -0.38
CAPN1-213ENST00000527897 PRKACAP17612 351 aa12.7□□□□□ -0.38
CAPN1-213ENST00000527897 GABRR1P24046 479 aa12.7□□□□□ -0.38
CAPN1-213ENST00000527897 PEX2P28328 305 aa12.7□□□□□ -0.38
CAPN1-213ENST00000527897 NPBWR2P48146 333 aa12.7□□□□□ -0.38
CAPN1-213ENST00000527897 ZNF782Q6ZMW2 699 aaPredicted RBP12.7□□□□□ -0.38
CAPN1-213ENST00000527897 UTS2BQ765I0 119 aa12.7□□□□□ -0.38
CAPN1-213ENST00000527897 LDLRAD3Q86YD5 345 aa12.7□□□□□ -0.38
CAPN1-213ENST00000527897 Q8IYB0 196 aa12.7□□□□□ -0.38
CAPN1-213ENST00000527897 FAM58AQ8N1B3 248 aa12.7□□□□□ -0.38
CAPN1-213ENST00000527897 SPSB1Q96BD6 273 aa12.7□□□□□ -0.38
CAPN1-213ENST00000527897 CHST6Q9GZX3 395 aa12.7□□□□□ -0.38
CAPN1-213ENST00000527897 C1RLQ9NZP8 487 aa12.7□□□□□ -0.38
CAPN1-213ENST00000527897 ZNRD1Q9P1U0 126 aa12.7□□□□□ -0.38
CAPN1-213ENST00000527897 TRBV2A0A0J9YWF9 115 aa12.69□□□□□ -0.38
CAPN1-213ENST00000527897 TMEM212A6NML5 194 aa12.69□□□□□ -0.38
CAPN1-213ENST00000527897 WBP4O75554 376 aaKnown RBP12.69□□□□□ -0.38
CAPN1-213ENST00000527897 ZFPL1O95159 310 aa12.69□□□□□ -0.38
CAPN1-213ENST00000527897 CCDC159P0C7I6 412 aa12.69□□□□□ -0.38
CAPN1-213ENST00000527897 GTF2A1P52655 376 aaPredicted RBP12.69□□□□□ -0.38
CAPN1-213ENST00000527897 ACSM1Q08AH1 577 aa12.69□□□□□ -0.38
CAPN1-213ENST00000527897 PDZK1IP1Q13113 114 aa12.69□□□□□ -0.38
CAPN1-213ENST00000527897 ZNF691Q5VV52 312 aa12.69□□□□□ -0.38
CAPN1-213ENST00000527897 SHISA2Q6UWI4 295 aa12.69□□□□□ -0.38
CAPN1-213ENST00000527897 RNF144BQ7Z419 303 aa12.69□□□□□ -0.38
CAPN1-213ENST00000527897 OR4F5Q8NH21 305 aa12.69□□□□□ -0.38
CAPN1-213ENST00000527897 C17orf50Q8WW18 174 aa12.69□□□□□ -0.38
CAPN1-213ENST00000527897 DYRK2Q92630 601 aa12.69□□□□□ -0.38
CAPN1-213ENST00000527897 FAM234AQ9H0X4 552 aa12.69□□□□□ -0.38
CAPN1-213ENST00000527897 ZCCHC4Q9H5U6 513 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms