RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 MTUS2Q5JR59 1369 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 PLEKHG1Q9ULL1 1385 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 FAM172BPA6NC97 362 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 ZNF729A6NN14 1252 aaPredicted RBP3.07□□□□□ -1.92
SKP1-209ENST00000522552 TRIM49D1C9J1S8 452 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 LAD1O00515 517 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 MYL12BO14950 172 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 NDUFS5O43920 106 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 ZFAND5O76080 213 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 REG1AP05451 166 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 IGHV3-43DP0DP04 118 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 GTF2F2P13984 249 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 SPNP16150 400 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 PRSS3P35030 304 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 CTRLP40313 264 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 TAS2R41P59536 307 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 TAS2R19P59542 299 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 LAMTOR4Q0VGL1 99 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 RSU1Q15404 277 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 TGIF1Q15583 401 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 PRR4Q16378 134 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 LIN52Q52LA3 116 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 ACSBG2Q5FVE4 666 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 HIST2H3PS2Q5TEC6 136 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 TMEM236Q5W0B7 351 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 TMEM215Q68D42 235 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 FAM71E1Q6IPT2 247 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 SPNS3Q6ZMD2 512 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 DGAT2L6Q6ZPD8 337 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 OLIG3Q7RTU3 272 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 SMIM29Q86T20 159 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 ZNF589Q86UQ0 364 aaPredicted RBP3.07□□□□□ -1.92
SKP1-209ENST00000522552 TMEM35BQ8NCS4 154 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 OR2G3Q8NGZ4 309 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 DCPSQ96C86 337 aaKnown RBP3.07□□□□□ -1.92
SKP1-209ENST00000522552 LRRC58Q96CX6 371 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 GALNT14Q96FL9 552 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 QKIQ96PU8 341 aaKnown RBP eCLIP3.07□□□□□ -1.921e-8■■■■■ 29.1
SKP1-209ENST00000522552 SIGMAR1Q99720 223 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 RTBDNQ9BSG5 229 aaPredicted RBP3.07□□□□□ -1.92
SKP1-209ENST00000522552 CHCHD5Q9BSY4 110 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 SLC25A39Q9BZJ4 359 aaPredicted RBP3.07□□□□□ -1.92
SKP1-209ENST00000522552 OR11A1Q9GZK7 315 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 CCL28Q9NRJ3 127 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 ARMC1Q9NVT9 282 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 DMAC2Q9NW81 257 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 TRMT112Q9UI30 125 aaKnown RBP3.07□□□□□ -1.92
SKP1-209ENST00000522552 GINS2Q9Y248 185 aa3.07□□□□□ -1.92
SKP1-209ENST00000522552 SMIM26A0A096LP01 95 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 CIB4A0PJX0 185 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 I3L4J1 428 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 SLC31A2O15432 143 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 NOS1APO75052 506 aaPredicted RBP3.06□□□□□ -1.92
SKP1-209ENST00000522552 DHRS3O75911 302 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 DUSP14O95147 198 aaKnown RBP3.06□□□□□ -1.92
SKP1-209ENST00000522552 EPPINO95925 133 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 RCVRNP35243 200 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 P2RX1P51575 399 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 GNB1P62873 340 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 IFITM2Q01629 132 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 EGFEM1PQ0D2K5 195 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 LY6DQ14210 128 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 SMCO1Q147U7 214 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 ARHGAP11BQ3KRB8 267 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 TRMT12Q53H54 448 aaKnown RBP3.06□□□□□ -1.92
SKP1-209ENST00000522552 TSPO2Q5TGU0 170 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 FBXW9Q5XUX1 488 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 MUC15Q8N387 334 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 CADM2Q8N3J6 435 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 UBAC2Q8NBM4 344 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 OR1L8Q8NGR8 309 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 NTN5Q8WTR8 489 aaPredicted RBP3.06□□□□□ -1.92
SKP1-209ENST00000522552 ITLN1Q8WWA0 313 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 TAMM41Q96BW9 452 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 SEH1LQ96EE3 360 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 CPNE2Q96FN4 548 aaPredicted RBP3.06□□□□□ -1.92
SKP1-209ENST00000522552 SMARCD1Q96GM5 515 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 SFRP2Q96HF1 295 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 FMC1Q96HJ9 113 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 TMEM204Q9BSN7 226 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 HEBP1Q9NRV9 189 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 CMTM6Q9NX76 183 aa3.06□□□□□ -1.92
SKP1-209ENST00000522552 F11RQ9Y624 299 aaKnown RBP3.06□□□□□ -1.92
SKP1-209ENST00000522552 A0A087X002 238 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 TRAV8-2A0A0B4J237 113 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 A8MXK9 166 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 C8orf87E5RJ46 101 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 ZNF253O75346 499 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 SUPT3HO75486 399 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 LYPLA1O75608 230 aaPredicted RBP3.05□□□□□ -1.92
SKP1-209ENST00000522552 TRBV12-3P01733 135 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 IL3P08700 152 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 ZDHHC11BP0C7U3 371 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 PLA2G2AP14555 144 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 ZNF708P17019 499 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 CXCL3P19876 107 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 GABRA4P48169 554 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 RAB5BP61020 215 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 SLC35A2P78381 396 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 PSG4Q00888 419 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms