RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 DDX18Q9NVP1 670 aaKnown RBP2.96□□□□□ -1.94
VPS13B-208ENST00000521037 NUDT4Q9NZJ9 180 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 CD274Q9NZQ7 290 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 OPTCQ9UBM4 332 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 PSME2Q9UL46 239 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 SLC7A7Q9UM01 511 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 POMPQ9Y244 141 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 ETV7Q9Y603 341 aa2.96□□□□□ -1.94
VPS13B-208ENST00000521037 A0A087WXM4 84 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 IGLV5-52A0A0A0MRZ9 124 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 TRBV5-5A0A0J9YX44 114 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 A0A1W2PPI3 338 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 RNF222A6NCQ9 220 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 A6NDX4 124 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 TRPC5OSA6NMA1 111 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 G3V2L1 256 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 PHYHO14832 338 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 NPFFO15130 113 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 ENSAO43768 121 aaKnown RBP2.95□□□□□ -1.94
VPS13B-208ENST00000521037 EIF1BO60739 113 aaKnown RBP2.95□□□□□ -1.94
VPS13B-208ENST00000521037 RAMP3O60896 148 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 TRMUO75648 421 aaKnown RBP2.95□□□□□ -1.94
VPS13B-208ENST00000521037 CYB5R3P00387 301 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-208ENST00000521037 HPRP00739 348 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 C1QCP02747 245 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 IFNW1P05000 195 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 DUX4L4P0CJ87 422 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 PRPS2P11908 318 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 COX4I1P13073 169 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 HLA-DOBP13765 273 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 EFNA1P20827 205 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-208ENST00000521037 MPIP34949 423 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 SAA4P35542 130 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 MAGEA12P43365 314 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 RANBP1P43487 201 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 AQP4P55087 323 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 ATP5IP56385 69 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-208ENST00000521037 ABCE1P61221 599 aaKnown RBP2.95□□□□□ -1.94
VPS13B-208ENST00000521037 RPS23P62266 143 aaKnown RBP2.95□□□□□ -1.94
VPS13B-208ENST00000521037 ARF6P62330 175 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 SLC35A1P78382 337 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 HPCAP84074 193 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 EWSR1Q01844 656 aaKnown RBP eCLIP2.95□□□□□ -1.94
VPS13B-208ENST00000521037 RELQ04864 619 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-208ENST00000521037 FUT5Q11128 374 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 PSG7Q13046 419 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 PMS2P3Q13401 168 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 APOFQ13790 326 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 CEACAM7Q14002 265 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 FLOT2Q14254 428 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 LY6EQ16553 131 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 ARHGAP11BQ3KRB8 267 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 SPANXN3Q5MJ09 141 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 PDZK1Q5T2W1 519 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 EPGNQ6UW88 154 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 LINC00299Q6ZSB3 139 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 FRA10AC1Q70Z53 315 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 PAGE2Q7Z2X7 111 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 GRINAQ7Z429 371 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 VMO1Q7Z5L0 202 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 CCDC36Q8IYA8 594 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 DEFB107AQ8IZN7 70 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 PGAM4Q8N0Y7 254 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 ZNF114Q8NC26 417 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 C19orf18Q8NEA5 215 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 OR2T12Q8NG77 320 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 OR4F6Q8NGB9 312 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 OR5AU1Q8NGC0 362 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 OR4C15Q8NGM1 316 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 OR4C13Q8NGP0 309 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 OR1J1Q8NGS3 322 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 PNPT1Q8TCS8 783 aaKnown RBP2.95□□□□□ -1.94
VPS13B-208ENST00000521037 KLF14Q8TD94 323 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-208ENST00000521037 GIPC3Q8TF64 312 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 ITLN1Q8WWA0 313 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 CIDECQ96AQ7 238 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-208ENST00000521037 MRPL53Q96EL3 112 aaKnown RBP2.95□□□□□ -1.94
VPS13B-208ENST00000521037 DUS3LQ96G46 650 aaKnown RBP2.95□□□□□ -1.94
VPS13B-208ENST00000521037 C4orf36Q96KX1 117 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 C4orf45Q96LM5 186 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 C17orf77Q96MU5 243 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 OR5M11Q96RB7 305 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 FUNDC2Q9BWH2 189 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 YTHDF1Q9BYJ9 559 aaKnown RBP2.95□□□□□ -1.94
VPS13B-208ENST00000521037 PIGUQ9H490 435 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 RHOJQ9H4E5 214 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 PLGRKTQ9HBL7 147 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 A4GALTQ9NPC4 353 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 RDH8Q9NYR8 311 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 MRTO4Q9UKD2 239 aaKnown RBP2.95□□□□□ -1.94
VPS13B-208ENST00000521037 PCTPQ9UKL6 214 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 PAIP2BQ9ULR5 123 aaKnown RBP2.95□□□□□ -1.94
VPS13B-208ENST00000521037 B9D1Q9UPM9 204 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 AP4S1Q9Y587 144 aa2.95□□□□□ -1.94
VPS13B-208ENST00000521037 IGLV5-37A0A075B6J1 123 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 TMED7-TICAM2A0A0A6YYA0 188 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 LOC102725191A0A1B0GVB3 256 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 A0A1W2PRD5 423 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 A0A1W2PRF3 423 aa2.94□□□□□ -1.94
VPS13B-208ENST00000521037 A0A1W2PRM7 423 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms