RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 APOBEC4Q8WW27 367 aaKnown RBP10.34□□□□□ -0.75
SYNPO-204ENST00000519664 H1FXQ92522 213 aaKnown RBP10.34□□□□□ -0.75
SYNPO-204ENST00000519664 ZNF501Q96CX3 271 aaPredicted RBP10.34□□□□□ -0.75
SYNPO-204ENST00000519664 IER2Q9BTL4 223 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 MRPL22Q9NWU5 206 aaKnown RBP10.34□□□□□ -0.75
SYNPO-204ENST00000519664 KLF13Q9Y2Y9 288 aaPredicted RBP10.34□□□□□ -0.75
SYNPO-204ENST00000519664 C7orf66A4D0T2 115 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 KITLGP21583 273 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 G0S2P27469 103 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 CALCRP30988 508 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 OR5M8Q8NGP6 311 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 KCNE4Q8WWG9 221 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 RAB39BQ96DA2 213 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 EDEM2Q9BV94 578 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 RTL8AQ9BWD3 113 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 ZFP64Q9NPA5 681 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 GHRLQ9UBU3 117 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 FER1L5A0AVI2 2057 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 TCAPO15273 167 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 ENSAO43768 121 aaKnown RBP10.33□□□□□ -0.76
SYNPO-204ENST00000519664 DUS4LO95620 317 aaKnown RBP10.33□□□□□ -0.76
SYNPO-204ENST00000519664 MT-ND4LP03901 98 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 ISXQ2M1V0 245 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 ARTNQ5T4W7 220 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 ZNF705AQ6ZN79 300 aaPredicted RBP10.33□□□□□ -0.76
SYNPO-204ENST00000519664 ZNF573Q86YE8 665 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 OR6X1Q8NH79 312 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 HGDQ93099 445 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 RPH3ALQ9UNE2 315 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 PATJQ8NI35 1801 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 IGKV1D-42A0A075B6H8 117 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 A0A087WV48 116 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 CTDSPLO15194 276 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 UPK3AO75631 287 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 OR2C1O95371 312 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 TTRP02766 147 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 CRYBA1P05813 215 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 OR5AC1P0C628 307 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 CPN1P15169 458 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 MPLP40238 635 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 MICBQ29980 383 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 CLEC18BQ6UXF7 455 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 ZDHHC22Q8N966 263 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 KISS1RQ969F8 398 aaPredicted RBP10.33□□□□□ -0.76
SYNPO-204ENST00000519664 OR51M1Q9H341 326 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 ERRFI1Q9UJM3 462 aaPredicted RBP10.33□□□□□ -0.76
SYNPO-204ENST00000519664 A0A1W2PQD3 144 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 TMEM218A2RU14 115 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 SLC22A20A6NK97 555 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 RNF212BA8MTL3 300 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 TGFBR3LH3BV60 316 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 SCGB1D1O95968 90 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 HBE1P02100 147 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 NDUFB7P17568 137 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 F2RL1P55085 397 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 PNLIPRP3Q17RR3 467 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 CBLN2Q8IUK8 224 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 UBALD2Q8IYN6 164 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 NECAP1Q8NC96 275 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 RNF133Q8WVZ7 376 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 ARV1Q9H2C2 271 aa10.33□□□□□ -0.76
SYNPO-204ENST00000519664 RCL1Q9Y2P8 373 aaKnown RBP10.33□□□□□ -0.76
SYNPO-204ENST00000519664 DOCK9Q9BZ29 2069 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 GEMIN2O14893 280 aaKnown RBP10.32□□□□□ -0.76
SYNPO-204ENST00000519664 SPINT2O43291 252 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 MMP16P51512 607 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 H2BFWTQ7Z2G1 175 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 OR1J1Q8NGS3 322 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 SPSB1Q96BD6 273 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 UBL7Q96S82 380 aaPredicted RBP10.32□□□□□ -0.76
SYNPO-204ENST00000519664 PCED1AQ9H1Q7 454 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 PHF3Q92576 2039 aaKnown RBP10.32□□□□□ -0.76
SYNPO-204ENST00000519664 MFSD2BA6NFX1 497 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 TAAR5O14804 337 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 FPR2P25090 351 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 CASP6P55212 293 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 DEFB109BQ30KR1 87 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 GGNBP1Q5YKI7 109 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 RPUSD4Q96CM3 377 aaKnown RBP10.32□□□□□ -0.76
SYNPO-204ENST00000519664 LOC285556D6RIA3 1793 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 CCDC187A0A096LP49 1063 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 TMEM127O75204 238 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 SFT2D2O95562 160 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 ZNF816Q0VGE8 651 aaPredicted RBP10.32□□□□□ -0.76
SYNPO-204ENST00000519664 RAB35Q15286 201 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 LINC01590Q5TEZ4 76 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 IL34Q6ZMJ4 242 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 NR2C2APQ86WQ0 139 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 FAM185AQ8N0U4 392 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 C15orf54Q8N8G6 183 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 UBAC2Q8NBM4 344 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 OR2Y1Q8NGV0 311 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 PLEKHA2Q9HB19 425 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 GAB2Q9UQC2 676 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 KCNK7Q9Y2U2 307 aa10.32□□□□□ -0.76
SYNPO-204ENST00000519664 FAM24AA6NFZ4 105 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 PHOX2AO14813 284 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 LYZL6O75951 148 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 DFFBO76075 338 aa10.31□□□□□ -0.76
SYNPO-204ENST00000519664 MT-CO2P00403 227 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms