RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 TLE3Q04726 772 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 SFRP4Q6FHJ7 346 aaPredicted RBP6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 CCDC144NLQ6NUI1 221 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 ZNF562Q6V9R5 426 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 RPTNQ6XPR3 784 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 FAM58AQ8N1B3 248 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 SMIM20Q8N5G0 67 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 FAM71E2Q8N5Q1 922 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 STEAP2Q8NFT2 490 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 OR52L1Q8NGH7 329 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 ADAMTS17Q8TE56 1095 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 NINJ1Q92982 152 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 JSRP1Q96MG2 331 aaPredicted RBP6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 SLC2A4RGQ9NR83 387 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 MED31Q9Y3C7 131 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 CPAMD8Q8IZJ3 1885 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 G3V3Y1 287 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 K7EQM0 130 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 HAX1O00165 279 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 PDE6DO43924 150 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 RCBTB2O95199 551 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 PPP1R3DO95685 299 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 CT45A8P0DMV1 189 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 CT45A9P0DMV2 189 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 AGTR1P30556 359 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 RPL4P36578 427 aaKnown RBP6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 GPR12P47775 334 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 DUSP3P51452 185 aaPredicted RBP6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 BAXQ07812 192 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 MMDQ15546 238 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 EXT1Q16394 746 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 TMEM241Q24JQ0 296 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 CT45A2Q5DJT8 189 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 ARL9Q6T311 187 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 HAVCR2Q8TDQ0 301 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 SECTM1Q8WVN6 248 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 PIK3IP1Q96FE7 263 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 PGLYRP3Q96LB9 341 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 WSB2Q9NYS7 404 aaPredicted RBP6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 CLN8Q9UBY8 286 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 FER1L5A0AVI2 2057 aa6.59□□□□□ -1.36
PDLIM5-219ENST00000514743 DMDP11532 3685 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 B4DGG1 531 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 CD14P08571 375 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 CD79AP11912 226 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 ACVR1BP36896 505 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 PITPNAQ00169 270 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 ZNF141Q15928 474 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 ABHD17BQ5VST6 288 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 GLDNQ6ZMI3 551 aaPredicted RBP6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 ACOT7LQ6ZUV0 252 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 OR8I2Q8N0Y5 310 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 KCNRGQ8N5I3 272 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 TMEM156Q8N614 296 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 FRZBQ92765 325 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 TNFRSF13CQ96RJ3 184 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 GPR174Q9BXC1 333 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 CHRNA10Q9GZZ6 450 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 TUBD1Q9UJT1 453 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 TRAV25A0A0B4J276 109 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 A0A1W2PPC4 97 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 NPIPA5E9PKD4 350 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 NPIPA3F8WFD2 350 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 DCTN6O00399 190 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 PLPP2O43688 288 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 WNT1P04628 370 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 SLC36A2Q495M3 483 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 ZNF585AQ6P3V2 769 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 NIT1Q86X76 327 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 PLPP5Q8NEB5 264 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 SLC2A12Q8TD20 617 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 ZNRF4Q8WWF5 429 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 GTSF1LQ9H1H1 148 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 ATG5Q9H1Y0 275 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 NPIPA1Q9UND3 350 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 FARSAQ9Y285 508 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 CFAP54Q96N23 3096 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 A0A0G2JK05 382 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 C4orf47A7E2U8 309 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 RBFOX2O43251 390 aaKnown RBP eCLIP6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 OR2F2O95006 317 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 TSPAN15O95858 294 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 PGAM2P15259 253 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 FAHP16930 419 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 DUSP1P28562 367 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 OR10J1P30954 320 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 DCTDP32321 178 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 CYB561P49447 251 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 SUMO3P55854 103 aaPredicted RBP6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 RANP62826 216 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 ALG10BQ5I7T1 473 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 TCF24Q7RTU0 167 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 OR6V1Q8N148 313 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 C1orf162Q8NEQ5 155 aaPredicted RBP6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 OR51D1Q8NGF3 324 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 OR51L1Q8NGJ5 315 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 OR5W2Q8NH69 310 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 GPR146Q96CH1 333 aa6.58□□□□□ -1.36
PDLIM5-219ENST00000514743 MICU1Q9BPX6 476 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms