RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 PDZK1IP1Q13113 114 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 TMEM155Q4W5P6 130 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 TEX36Q5VZQ5 186 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 STUMQ69YW2 141 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 C22orf42Q6IC83 251 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 METAP1DQ6UB28 335 aaPredicted RBP8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 ACP7Q6ZNF0 438 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 REC114Q7Z4M0 266 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 LRRTM1Q86UE6 522 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 SPICQ8N5J4 248 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 JAGN1Q8N5M9 183 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 ZNF671Q8TAW3 534 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 EMG1Q92979 244 aaKnown RBP8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 TMIGD2Q96BF3 282 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 CEP19Q96LK0 163 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 KCNK15Q9H427 330 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 SMURF1Q9HCE7 757 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 TCF7L1Q9HCS4 588 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 VCX3AQ9NNX9 186 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 TMEM138Q9NPI0 162 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 NLKQ9UBE8 527 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 OR14J1Q9UGF5 321 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 PCDHB10Q9UN67 800 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 FOXJ3Q9UPW0 622 aa8.18□□□□□ -1.1
TOPBP1-209ENST00000513818 YLPM1P49750 1951 aaKnown RBP8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 TRAV38-1A0A0B4J264 116 aa8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 LOC100506127A0A0U1RQW1 187 aa8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 F5H0A9 414 aaPredicted RBP8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 TRAPPC2LH3BP13 241 aa8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 LY6G6DO95868 133 aa8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 SFTPBP07988 381 aa8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 PSG2P11465 335 aa8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 PRKACAP17612 351 aa8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 PSMA1P25786 263 aaKnown RBP8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 TGFBR1P36897 503 aa8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 OR10A3P58181 314 aa8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 ERVK11-1P61568 191 aa8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 LCN2P80188 198 aa8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 IKZF1Q13422 519 aa8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 TRAM1Q15629 374 aa8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 MICBQ29980 383 aa8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 DCDC5Q6ZRR9 648 aa8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 MUC20Q8N307 709 aaPredicted RBP8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 OR4D6Q8NGJ1 314 aa8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 OR51F2Q8NH61 342 aa8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 MSI2Q96DH6 328 aaKnown RBP8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 CYYR1Q96J86 154 aa8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 GAFA1Q96PS6 74 aa8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 GFI1Q99684 422 aa8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 CHCHD6Q9BRQ6 235 aa8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 CNTD2Q9H8S5 307 aa8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 PATZ1Q9HBE1 687 aaKnown RBP8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 PGPEP1Q9NXJ5 209 aa8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 AK6Q9Y3D8 172 aaKnown RBP8.17□□□□□ -1.1
TOPBP1-209ENST00000513818 IGKV1D-17A0A075B6S4 117 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 TRDV1A0A1B0GX56 115 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 NKX6-3A6NJ46 265 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 RFPL4AA6NLU0 287 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 OR2AT4A6NND4 320 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 ARHGAP32A7KAX9 2087 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 RFPL4AL1F8VTS6 287 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 TMPRSS2O15393 492 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 ALX3O95076 343 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 CYB5AP00167 134 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 ALDOBP05062 364 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 SRMP19623 302 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 ZFP36P26651 326 aaKnown RBP8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 CFHR2P36980 270 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 PITPNBP48739 271 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 LSM3P62310 102 aaKnown RBP8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 PDCD1Q15116 288 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 DGUOKQ16854 277 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 SMIM21Q3B7S5 101 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 AWAT2Q6E213 333 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 CD200R1LQ6Q8B3 271 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 MED13LQ71F56 2210 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 MKXQ8IYA7 352 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 CD177Q8N6Q3 437 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 OR8B3Q8NGG8 313 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 ANGPTL6Q8NI99 470 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 THRSPQ92748 146 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 RAB39BQ96DA2 213 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 YIPF6Q96EC8 236 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 NEIL1Q96FI4 390 aaPredicted RBP8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 OR8B2Q96RD0 313 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 CENPOQ9BU64 300 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 MRPS26Q9BYN8 205 aaKnown RBP8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 HES4Q9HCC6 221 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 TXNL4BQ9NX01 149 aaKnown RBP8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 ZNF581Q9P0T4 197 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 ZNF222Q9UK12 451 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 STUB1Q9UNE7 303 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 ING4Q9UNL4 249 aa8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 MRPS28Q9Y2Q9 187 aaKnown RBP8.16□□□□□ -1.1
TOPBP1-209ENST00000513818 KIAA1324LA8MWY0 1029 aaPredicted RBP8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 DVL1O14640 695 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 TNFRSF13BO14836 293 aaPredicted RBP8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 NOS1APO75052 506 aaPredicted RBP8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 ARL6IP5O75915 188 aa8.15□□□□□ -1.1
TOPBP1-209ENST00000513818 KDM4BO94953 1096 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms