RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 ABCD2Q9UBJ2 740 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 ENPP5Q9UJA9 477 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 PIGLQ9Y2B2 252 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 V9GYQ6 96 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 PLECQ15149 4684 aaKnown RBP8.61□□□□□ -1.03
DDX41-216ENST00000513562 ACOD1A6NK06 481 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 RIIAD1A6NNX1 92 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 SERPINE3A8MV23 424 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 PSMD9O00233 223 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 NRASP01111 189 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 FAM106CPP0CH98 169 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 SLC35B1P78383 322 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 DEFB136Q30KP8 78 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 SAMD4BQ5PRF9 694 aaKnown RBP8.6□□□□□ -1.03
DDX41-216ENST00000513562 TPTE2P1Q5T6R2 138 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 TMEM42Q69YG0 159 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 BAIAP2L2Q6UXY1 529 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 TPRX1Q8N7U7 411 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 C5orf56Q8N8D9 126 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 THEM6Q8WUY1 208 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 SNX22Q96L94 193 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 PKIBQ9C010 78 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 DCLRE1BQ9H816 532 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 ZMAT4Q9H898 229 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 EDA2RQ9HAV5 297 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 GPR84Q9NQS5 396 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 CMC2Q9NRP2 79 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 FAM206AQ9NX38 181 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 DNAJB9Q9UBS3 223 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 LINC00527Q9UJ94 153 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 KLHDC2Q9Y2U9 406 aa8.6□□□□□ -1.03
DDX41-216ENST00000513562 FAM90A18PA6NE21 464 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 ARRDC5A6NEK1 342 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 FAM90A16PA6NEW6 464 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 FAM90A20PA6NIJ5 464 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 FAM183AA6NL82 134 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 FAM90A9PA6NNJ1 464 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 FAM90A12PA8MX19 464 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 FAM90A5PA8MXJ8 464 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 OOSP1A8MZH6 123 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 F8VVB4 439 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 F8VWA3 439 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 LY6LH3BQJ8 138 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 GSC2O15499 205 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 SELENOFO60613 162 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 GASTP01350 101 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 FABP3P05413 133 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 FRMD6-AS1P0C7T7 363 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 FAM90A15PP0C7V4 464 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 FAM90A13PP0C7W8 464 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 FAM90A14PP0C7W9 464 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 FAM90A24PP0C7X0 464 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 CD34P28906 385 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 CEACAM3P40198 252 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 HMGA2P52926 109 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 IL24Q13007 206 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 KIR2DS1Q14954 304 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 ZNF260Q3ZCT1 412 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 PRAMEF5Q5TYX0 476 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 OR52W1Q6IF63 320 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 CCDC144NLQ6NUI1 221 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 HACD2Q6Y1H2 254 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 OVCH2Q7RTZ1 564 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 COMMD2Q86X83 199 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 THNSL2Q86YJ6 484 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 STPG2Q8N412 459 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 OR51E1Q8TCB6 317 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 MCUR1Q96AQ8 359 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 CREB3L1Q96BA8 519 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 ISOC1Q96CN7 298 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 TEAD3Q99594 435 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 GORASP2Q9H8Y8 452 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 IL1RAPQ9NPH3 570 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 ARMC1Q9NVT9 282 aa8.59□□□□□ -1.03
DDX41-216ENST00000513562 UBE2J1Q9Y385 318 aaPredicted RBP8.59□□□□□ -1.03
DDX41-216ENST00000513562 TMEM269A0A1B0GVZ9 245 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 BUB1B-PAK6H3BSN5 160 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 DLGAP1O14490 977 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 FGF16O43320 207 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 DHRS3O75911 302 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 KRT36O76013 467 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 SOX14O95416 240 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 LY86O95711 162 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 IGHG2P01859 326 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 RPLP1P05386 114 aaKnown RBP8.58□□□□□ -1.04
DDX41-216ENST00000513562 COX4I1P13073 169 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 CDK2P24941 298 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 MNDAP41218 407 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 CDX1P47902 265 aaPredicted RBP8.58□□□□□ -1.04
DDX41-216ENST00000513562 SF3A3Q12874 501 aaKnown RBP eCLIP8.58□□□□□ -1.045e-6■■□□□ 14.3
DDX41-216ENST00000513562 FHL3Q13643 280 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 GRK1Q15835 563 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 HLA-DRB5Q30154 266 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 CLVS2Q5SYC1 327 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 CGB2Q6NT52 195 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 TEX38Q6PEX7 206 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 HEPN1Q6WQI6 88 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 LCNL1Q6ZST4 164 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 ASRGL1Q7L266 308 aa8.58□□□□□ -1.04
DDX41-216ENST00000513562 SLC35E3Q7Z769 313 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms