RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 IGKV1-12A0A0C4DH73 117 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 SHISA3A0PJX4 238 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 FAM229AH3BQW9 127 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 SLC17A2O00624 439 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 NDUFA2O43678 99 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 ANGPTL7O43827 346 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 ZNF780AO75290 641 aaPredicted RBP6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 GABARAPO95166 117 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 IGKV1D-12P01611 117 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 CD37P11049 281 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 RAB3BP20337 219 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 BCL3P20749 454 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 CFPP27918 469 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 RBMXP38159 391 aaKnown RBP6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 PTGFRP43088 359 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 BMXP51813 675 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 LOXL1Q08397 574 aaPredicted RBP6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 GPR176Q14439 515 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 RSU1Q15404 277 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 MICBQ29980 383 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 SPIN3Q5JUX0 258 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 C1orf100Q5SVJ3 147 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 FAM201AQ5SY85 155 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 STUMQ69YW2 141 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 AWAT2Q6E213 333 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 SFRP4Q6FHJ7 346 aaPredicted RBP6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 SPNS3Q6ZMD2 512 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 ACP7Q6ZNF0 438 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 DCDC5Q6ZRR9 648 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 SLC16A12Q6ZSM3 486 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 LRRC28Q86X40 367 aaPredicted RBP6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 ANKRD13BQ86YJ7 626 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 FAM58AQ8N1B3 248 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 OR4D6Q8NGJ1 314 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 CLDND2Q8NHS1 167 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 TBC1D15Q8TC07 691 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 EMG1Q92979 244 aaKnown RBP6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 RAB39BQ96DA2 213 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 ZNF488Q96MN9 340 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 GFI1Q99684 422 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 NKX3-1Q99801 234 aaPredicted RBP6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 DNTTIP1Q9H147 329 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 WDR13Q9H1Z4 485 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 CNTD2Q9H8S5 307 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 PLGRKTQ9HBL7 147 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 TMEM165Q9HC07 324 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 IL36GQ9NZH8 169 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 GHRLQ9UBU3 117 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 MRPS28Q9Y2Q9 187 aaKnown RBP6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 V9GY05 133 aa6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 ZNF469Q96JG9 3925 aaPredicted RBP6.35□□□□□ -1.39
HMGXB3-204ENST00000513318 IGHV4-61A0A0C4DH41 118 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 NKX6-3A6NJ46 265 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 OR2AT4A6NND4 320 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 CEACAM18A8MTB9 384 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 AIPO00170 330 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 WNT9BO14905 357 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 SLC22A1O15245 554 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 NOL3O60936 208 aaKnown RBP6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 CDRT1O95170 752 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 ZNF205O95201 554 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 KNG1P01042 644 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 IGHV2-5P01817 119 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 CSTBP04080 98 aaKnown RBP6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 HEXAP06865 529 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 UBBP0CG47 229 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 RPS2P15880 293 aaKnown RBP6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 SERPINA2P20848 420 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 USF1P22415 310 aaPredicted RBP6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 CPT2P23786 658 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 HTR2CP28335 458 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 SDC2P34741 201 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 CAPZA1P52907 286 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 GMFBP60983 142 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 FGF12P61328 243 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 LSM3P62310 102 aaKnown RBP6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 HOXA4Q00056 320 aaPredicted RBP6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 DGUOKQ16854 277 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 GPR107Q5VW38 600 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 ELP2Q6IA86 826 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 FAM166AQ6J272 317 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 GLIPR1L1Q6UWM5 242 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 ASCL4Q6XD76 172 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 NLRC3Q7RTR2 1065 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 SLC36A1Q7Z2H8 476 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 BATF2Q8N1L9 274 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 C19orf18Q8NEA5 215 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 Q8NFD4 153 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 ANGPTL6Q8NI99 470 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 RAB2BQ8WUD1 216 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 BCL7BQ9BQE9 202 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 TMEM246Q9BRR3 403 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 REG4Q9BYZ8 158 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 CST11Q9H112 138 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 METTL9Q9H1A3 318 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 NARFLQ9H6Q4 476 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 RNF167Q9H6Y7 350 aa6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 ELL3Q9HB65 397 aaPredicted RBP6.34□□□□□ -1.39
HMGXB3-204ENST00000513318 PATZ1Q9HBE1 687 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms