RNA–Protein interactions for RNA: ENST00000513248.1

NUP54-212, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-212ENST00000513248 TMEM38BQ9NVV0 291 aa2.92□□□□□ -1.94
NUP54-212ENST00000513248 ZNF446Q9NWS9 450 aa2.92□□□□□ -1.94
NUP54-212ENST00000513248 CMTM6Q9NX76 183 aa2.92□□□□□ -1.94
NUP54-212ENST00000513248 TAS2R5Q9NYW4 299 aa2.92□□□□□ -1.94
NUP54-212ENST00000513248 TAAR3PQ9P1P4 343 aa2.92□□□□□ -1.94
NUP54-212ENST00000513248 KLK11Q9UBX7 282 aa2.92□□□□□ -1.94
NUP54-212ENST00000513248 SLC7A8Q9UHI5 535 aa2.92□□□□□ -1.94
NUP54-212ENST00000513248 TMCC3Q9ULS5 477 aa2.92□□□□□ -1.94
NUP54-212ENST00000513248 SAMD4AQ9UPU9 718 aaKnown RBP2.92□□□□□ -1.94
NUP54-212ENST00000513248 DNAJC13O75165 2243 aa2.92□□□□□ -1.94
NUP54-212ENST00000513248 CACNA1CQ13936 2221 aa2.92□□□□□ -1.94
NUP54-212ENST00000513248 INTS1Q8N201 2190 aaKnown RBP2.91□□□□□ -1.94
NUP54-212ENST00000513248 ADGRG4Q8IZF6 3080 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 ISPDA4D126 451 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 C5orf49A4QMS7 147 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 LRP5LA4QPB2 252 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 RNF212BA8MTL3 300 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 CENPBD1B2RD01 187 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 H7C1C5 153 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 FXYD1O00168 92 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 NME4O00746 187 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 GPRIN2O60269 458 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 MGRN1O60291 552 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 OR10H3O60404 316 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 NDUFB2O95178 105 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 GADD45GO95257 159 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 SLC2A10O95528 541 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 RENP00797 406 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 TGFAP01135 160 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 IGKV3-15P01624 115 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 THY1P04216 161 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 SERPINA5P05154 406 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 ASAH2BP0C7U1 165 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 PGA4P0DJD7 388 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 PGA3P0DJD8 388 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 ZNF14P17017 642 aaPredicted RBP2.91□□□□□ -1.94
NUP54-212ENST00000513248 ZNF32P17041 273 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 GSTM3P21266 225 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 PCMT1P22061 227 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 GIFP27352 417 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 LAP3P28838 519 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 PRDX6P30041 224 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 RRM2P31350 389 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 GLRXP35754 106 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 GPR6P46095 362 aaPredicted RBP2.91□□□□□ -1.94
NUP54-212ENST00000513248 PPOXP50336 477 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 MNAT1P51948 309 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 KLF3P57682 345 aaPredicted RBP2.91□□□□□ -1.94
NUP54-212ENST00000513248 RPL27P61353 136 aaKnown RBP2.91□□□□□ -1.94
NUP54-212ENST00000513248 LCN6P62502 163 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 GLO1Q04760 184 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 LOXL1Q08397 574 aaPredicted RBP2.91□□□□□ -1.94
NUP54-212ENST00000513248 SCRN3Q0VDG4 424 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 RIGQ13278 110 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 KIAA0141Q14154 515 aaPredicted RBP2.91□□□□□ -1.94
NUP54-212ENST00000513248 MAD2L1BPQ15013 274 aaPredicted RBP2.91□□□□□ -1.94
NUP54-212ENST00000513248 TMEM249Q2WGJ8 235 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 ANKDD1AQ495B1 522 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 ZBED5Q49AG3 693 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 PABPC1L2AQ5JQF8 200 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 SPATA46Q5T0L3 261 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 THEM4Q5T1C6 240 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 CRYBG3Q68DQ2 2970 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 C11orf71Q6IPW1 123 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 C1orf94Q6P1W5 598 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 DNM1P34Q6PK57 102 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 UGT2A3Q6UWM9 527 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 HACD2Q6Y1H2 254 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 MBOAT2Q6ZWT7 520 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 VTCN1Q7Z7D3 282 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 CROCCP3Q8IVE0 287 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 AQP12AQ8IXF9 295 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 OFCC1Q8IZS5 231 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 ZCCHC24Q8N2G6 241 aaKnown RBP2.91□□□□□ -1.94
NUP54-212ENST00000513248 ABHD12Q8N2K0 398 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 OR13C2Q8NGS9 318 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 OR52J3Q8NH60 311 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 AKR7LQ8NHP1 331 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 C10orf105Q8TEF2 133 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 ACOT11Q8WXI4 607 aaPredicted RBP2.91□□□□□ -1.94
NUP54-212ENST00000513248 MRPL24Q96A35 216 aaKnown RBP2.91□□□□□ -1.94
NUP54-212ENST00000513248 NABP1Q96AH0 204 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 TIMD4Q96H15 378 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 NSMCE2Q96MF7 247 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 DOK1Q99704 481 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 PRSS27Q9BQR3 290 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 ALG12Q9BV10 488 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 MRPL37Q9BZE1 423 aaKnown RBP2.91□□□□□ -1.94
NUP54-212ENST00000513248 BCL2L14Q9BZR8 327 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 BPESC1Q9GZL8 116 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 TXNIPQ9H3M7 391 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 SIAEQ9HAT2 523 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 ELOVL3Q9HB03 270 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 LPAR2Q9HBW0 351 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 MEPEQ9NQ76 525 aaPredicted RBP2.91□□□□□ -1.94
NUP54-212ENST00000513248 ARL2BPQ9Y2Y0 163 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 ENPP4Q9Y6X5 453 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 RTTNQ86VV8 2226 aa2.91□□□□□ -1.94
NUP54-212ENST00000513248 FREM3P0C091 2139 aa2.9□□□□□ -1.94
NUP54-212ENST00000513248 MED12Q93074 2177 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms