RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 MLF2Q15773 248 aaPredicted RBP4.99□□□□□ -1.61
CHD1-208ENST00000512392 PLPPR5Q32ZL2 321 aa4.99□□□□□ -1.61
CHD1-208ENST00000512392 SMARCD3Q6STE5 483 aa4.99□□□□□ -1.61
CHD1-208ENST00000512392 OR4P4Q8NGL7 312 aa4.99□□□□□ -1.61
CHD1-208ENST00000512392 ZFAND1Q8TCF1 268 aa4.99□□□□□ -1.61
CHD1-208ENST00000512392 GHSRQ92847 366 aa4.99□□□□□ -1.61
CHD1-208ENST00000512392 YIPF3Q9GZM5 350 aa4.99□□□□□ -1.61
CHD1-208ENST00000512392 RNASE7Q9H1E1 156 aaKnown RBP4.99□□□□□ -1.61
CHD1-208ENST00000512392 WDR13Q9H1Z4 485 aa4.99□□□□□ -1.61
CHD1-208ENST00000512392 TDRD15B5MCY1 1934 aaKnown RBP4.99□□□□□ -1.61
CHD1-208ENST00000512392 SAA2-SAA4A0A096LPE2 208 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 MAP1LC3B2A6NCE7 125 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 RBFOX3A6NFN3 312 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 E9PLD3 99 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 FAAHO00519 579 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 HMGB3O15347 200 aaKnown RBP4.98□□□□□ -1.61
CHD1-208ENST00000512392 CYB5BO43169 146 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 GKN3PP0CG01 181 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 IFI30P13284 250 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 GGT2P36268 569 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 RFX2P48378 723 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 HIST1H3AP68431 136 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 H3F3AP84243 136 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 SYCE2Q6PIF2 218 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 HIST2H3AQ71DI3 136 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 CBR4Q8N4T8 237 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 OR52L1Q8NGH7 329 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 OR1S1Q8NH92 325 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 NEIL3Q8TAT5 605 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 LINC00476Q8WZB0 136 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 MAP1LC3BQ9GZQ8 125 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 CALYQ9NYX4 217 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 BAZ1BQ9UIG0 1483 aaKnown RBP4.98□□□□□ -1.61
CHD1-208ENST00000512392 SMCHD1A6NHR9 2005 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 IGLV5-45A0A087WSX0 123 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 A0A087WWV3 80 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 TRAV8-4A0A0B4J246 113 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 IGHV4-61A0A0C4DH41 118 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 MSGN1A6NI15 193 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 FOXI3A8MTJ6 420 aaPredicted RBP4.98□□□□□ -1.61
CHD1-208ENST00000512392 C5orf58C9J3I9 102 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 ORC5O43913 435 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 MOSP00540 346 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 P01737 135 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 IGHV4-59P01825 116 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 FCGR2CP31995 323 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 PRSS3P35030 304 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 TALDO1P37837 337 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 ERVFC1-1P60608 527 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 LCE5AQ5TCM9 118 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 LEMD1Q68G75 181 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 C1QL2Q7Z5L3 287 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 TGIF2LYQ8IUE0 185 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 SLC22A18ASQ8N1D0 253 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 MFSD8Q8NHS3 518 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 SKA2Q8WVK7 121 aaPredicted RBP4.98□□□□□ -1.61
CHD1-208ENST00000512392 RGP1Q92546 391 aaPredicted RBP4.98□□□□□ -1.61
CHD1-208ENST00000512392 TMEM230Q96A57 120 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 C14orf144Q96I85 54 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 SLC45A3Q96JT2 553 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 PGLYRP4Q96LB8 373 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 OCIAD1Q9NX40 245 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 MED29Q9NX70 200 aa4.98□□□□□ -1.61
CHD1-208ENST00000512392 IGHV1OR21-1A0A087WYE8 117 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 G3V2L1 256 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 GCM2O75603 506 aaPredicted RBP4.97□□□□□ -1.61
CHD1-208ENST00000512392 IL3P08700 152 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 SLC35G6P0C7Q6 338 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 SULT1A3P0DMM9 295 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 SULT1A4P0DMN0 295 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 HKR1P10072 659 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 HSD17B1P14061 328 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 TCN2P20062 427 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 PFN2P35080 140 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 DCUN1D2Q6PH85 259 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 TMPPEQ6ZT21 453 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 TCF24Q7RTU0 167 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 DOLPP1Q86YN1 238 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 C6orf223Q8N319 242 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 COX18Q8N8Q8 333 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 UBAC2Q8NBM4 344 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 OR10G7Q8NGN6 311 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 GNPDA2Q8TDQ7 276 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 SECTM1Q8WVN6 248 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 CYGBQ8WWM9 190 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 DNAJC30Q96LL9 226 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 ZNF300Q96RE9 604 aaPredicted RBP4.97□□□□□ -1.61
CHD1-208ENST00000512392 ISG20L2Q9H9L3 353 aaKnown RBP4.97□□□□□ -1.61
CHD1-208ENST00000512392 EXOSC3Q9NQT5 275 aaKnown RBP4.97□□□□□ -1.61
CHD1-208ENST00000512392 SPRR3Q9UBC9 169 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 VDAC3Q9Y277 283 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 ASTN1O14525 1302 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 NCOA1Q15788 1441 aa4.97□□□□□ -1.61
CHD1-208ENST00000512392 OR5H1A6NKK0 313 aa4.96□□□□□ -1.61
CHD1-208ENST00000512392 ZNF850A8MQ14 1090 aa4.96□□□□□ -1.61
CHD1-208ENST00000512392 SLC17A3O00476 420 aa4.96□□□□□ -1.61
CHD1-208ENST00000512392 SPAG7O75391 227 aa4.96□□□□□ -1.61
CHD1-208ENST00000512392 PAK4O96013 591 aaPredicted RBP4.96□□□□□ -1.61
CHD1-208ENST00000512392 LALBAP00709 142 aa4.96□□□□□ -1.61
CHD1-208ENST00000512392 RENP00797 406 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms