RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 CAMK2DQ13557 499 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 GINS1Q14691 196 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 ELFN2Q5R3F8 820 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 FAM69AQ5T7M9 428 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 OR2G6Q5TZ20 316 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 PRAMEF8Q5VWM4 474 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 PRAMEF7Q5VXH5 474 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 HIST2H2AA3Q6FI13 130 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 SLC27A4Q6P1M0 643 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 AGTRAPQ6RW13 159 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 TFAP2EQ6VUC0 442 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 PQLC2Q6ZP29 291 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 RASSF6Q6ZTQ3 369 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 BHLHA15Q7RTS1 189 aaPredicted RBP4.36□□□□□ -1.71
GYPB-212ENST00000511198 COMMD6Q7Z4G1 85 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 HSD17B13Q7Z5P4 300 aaPredicted RBP4.36□□□□□ -1.71
GYPB-212ENST00000511198 GID4Q8IVV7 300 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 DND1Q8IYX4 353 aaKnown RBP4.36□□□□□ -1.71
GYPB-212ENST00000511198 UBE2J2Q8N2K1 259 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 EIF4E3Q8N5X7 224 aaKnown RBP4.36□□□□□ -1.71
GYPB-212ENST00000511198 WDSUB1Q8N9V3 476 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 FAM71CQ8NEG0 241 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 OR5T2Q8NGG2 359 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 OR2T4Q8NH00 348 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 OR5R1Q8NH85 324 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 NUBPLQ8TB37 319 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 C16orf78Q8WTQ4 265 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 SKA2Q8WVK7 121 aaPredicted RBP4.36□□□□□ -1.71
GYPB-212ENST00000511198 ASB13Q8WXK3 278 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 OSTF1Q92882 214 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 PTP4A1Q93096 173 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 TMEM203Q969S6 136 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 SENP5Q96HI0 755 aaPredicted RBP4.36□□□□□ -1.71
GYPB-212ENST00000511198 GMPPAQ96IJ6 420 aaPredicted RBP4.36□□□□□ -1.71
GYPB-212ENST00000511198 FOPNLQ96NB1 174 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 SFXN2Q96NB2 322 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 RCHY1Q96PM5 261 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 RBP7Q96R05 134 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 PELOQ9BRX2 385 aaKnown RBP4.36□□□□□ -1.71
GYPB-212ENST00000511198 FNDC11Q9BVV2 318 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 ZNF436Q9C0F3 470 aaPredicted RBP4.36□□□□□ -1.71
GYPB-212ENST00000511198 RAB1BQ9H0U4 201 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 FN3KQ9H479 309 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 FKRPQ9H9S5 495 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 SEBOXQ9HB31 216 aaPredicted RBP4.36□□□□□ -1.71
GYPB-212ENST00000511198 MIEF1Q9NQG6 463 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 NUDT15Q9NV35 164 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 RDH8Q9NYR8 311 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 AHSPQ9NZD4 102 aa4.36□□□□□ -1.71
GYPB-212ENST00000511198 HEATR1Q9H583 2144 aaKnown RBP4.36□□□□□ -1.71
GYPB-212ENST00000511198 IGHV3OR16-10A0A075B7F0 116 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 A8MXK9 166 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 SRRM5B3KS81 715 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 LRRN3E7EW58 273 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 VCYO14598 125 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 RNF13O43567 381 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 ANGPTL7O43827 346 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 STX11O75558 287 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 SC5DO75845 299 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 SCO1O75880 301 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 MPC2O95563 127 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 ECDO95905 644 aaPredicted RBP4.35□□□□□ -1.71
GYPB-212ENST00000511198 HMGN1P05114 100 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 C1GALT1C1LP0DN25 315 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 RNH1P13489 461 aaKnown RBP4.35□□□□□ -1.71
GYPB-212ENST00000511198 ZNF250P15622 560 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 PRKACAP17612 351 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 RAB3AP20336 220 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 COL8A2P25067 703 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 MAPK3P27361 379 aaPredicted RBP4.35□□□□□ -1.71
GYPB-212ENST00000511198 IMPA1P29218 277 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 CALCRP30988 508 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 CDAP32320 146 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 PTGDSP41222 190 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 FRKP42685 505 aaPredicted RBP4.35□□□□□ -1.71
GYPB-212ENST00000511198 GPR6P46095 362 aaPredicted RBP4.35□□□□□ -1.71
GYPB-212ENST00000511198 ARFIP1P53367 373 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 AP3S2P59780 193 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 RPS15AP62244 130 aaKnown RBP4.35□□□□□ -1.71
GYPB-212ENST00000511198 CSNK2A1P68400 391 aaPredicted RBP4.35□□□□□ -1.71
GYPB-212ENST00000511198 S100A12P80511 92 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 TSPAN31Q12999 210 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 TSTA3Q13630 321 aaPredicted RBP4.35□□□□□ -1.71
GYPB-212ENST00000511198 ZNF273Q14593 569 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 OPCMLQ14982 345 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 HERPUD1Q15011 391 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 GSG1Q2KHT4 349 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 LGALSLQ3ZCW2 172 aaPredicted RBP4.35□□□□□ -1.71
GYPB-212ENST00000511198 NHLRC3Q5JS37 347 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 AADACL4Q5VUY2 407 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 METTL11BQ5VVY1 283 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 SMARCD3Q6STE5 483 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 ZNF322Q6U7Q0 402 aaPredicted RBP4.35□□□□□ -1.71
GYPB-212ENST00000511198 TMIGD1Q6UXZ0 262 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 KRT74Q7RTS7 529 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 NUFIP2Q7Z417 695 aaKnown RBP4.35□□□□□ -1.71
GYPB-212ENST00000511198 TMPRSS11BQ86T26 416 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 TIGD4Q8IY51 512 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 CA13Q8N1Q1 262 aa4.35□□□□□ -1.71
GYPB-212ENST00000511198 FTMTQ8N4E7 242 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms