RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 MEX3AA1L020 520 aaKnown RBP10.53□□□□□ -0.72
HMGCS1-205ENST00000508319 VGLL3A8MV65 326 aa10.53□□□□□ -0.72
HMGCS1-205ENST00000508319 RBP4P02753 201 aa10.53□□□□□ -0.72
HMGCS1-205ENST00000508319 KIR3DL2P43630 455 aa10.53□□□□□ -0.72
HMGCS1-205ENST00000508319 KIR2DS4P43632 304 aa10.53□□□□□ -0.72
HMGCS1-205ENST00000508319 LDLRAD2Q5SZI1 272 aa10.53□□□□□ -0.72
HMGCS1-205ENST00000508319 HIST2H2BDQ6DRA6 164 aa10.53□□□□□ -0.72
HMGCS1-205ENST00000508319 LIAT1Q6ZQX7 453 aa10.53□□□□□ -0.72
HMGCS1-205ENST00000508319 OR8H2Q8N162 312 aa10.53□□□□□ -0.72
HMGCS1-205ENST00000508319 DYNAPQ8N1N2 210 aa10.53□□□□□ -0.72
HMGCS1-205ENST00000508319 OR8J1Q8NGP2 316 aa10.53□□□□□ -0.72
HMGCS1-205ENST00000508319 FAM110DQ8TAY7 271 aaPredicted RBP10.53□□□□□ -0.72
HMGCS1-205ENST00000508319 EME1Q96AY2 570 aa10.53□□□□□ -0.72
HMGCS1-205ENST00000508319 IL36RNQ9UBH0 155 aa10.53□□□□□ -0.72
HMGCS1-205ENST00000508319 FOXJ3Q9UPW0 622 aa10.53□□□□□ -0.72
HMGCS1-205ENST00000508319 SLC7A11Q9UPY5 501 aa10.53□□□□□ -0.72
HMGCS1-205ENST00000508319 NOTCH3Q9UM47 2321 aa10.52□□□□□ -0.72
HMGCS1-205ENST00000508319 TMEM82A0PJX8 343 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 SAC3D1A6NKF1 404 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 GATBO75879 557 aaKnown RBP10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 CSF1P09603 554 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 UBCP0CG48 685 aaKnown RBP10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 ZNF728P0DKX0 622 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 RASSF2P50749 326 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 FUT6P51993 359 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 LGALS4P56470 323 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 ZNF85Q03923 595 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 TMED1Q13445 227 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 HERPUD1Q15011 391 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 ZNF626Q68DY1 528 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 C11orf88Q6PI97 169 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 Q6ZTK2 550 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 SLC25A26Q70HW3 274 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 C1QL4Q86Z23 238 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 KLHDC1Q8N7A1 406 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 CCDC54Q8NEL0 328 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 OR2T6Q8NHC8 308 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 CFHR4Q92496 578 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 C10orf35Q96D05 121 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 BORCS8Q96FH0 119 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 CENPNQ96H22 339 aaPredicted RBP10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 OSBPL10Q9BXB5 764 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 NPFFR1Q9GZQ6 430 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 GNG8Q9UK08 70 aa10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 TBL2Q9Y4P3 447 aaKnown RBP10.52□□□□□ -0.73
HMGCS1-205ENST00000508319 PLXNB1O43157 2135 aa10.51□□□□□ -0.73
HMGCS1-205ENST00000508319 IGKV1-9A0A0C4DH69 117 aa10.51□□□□□ -0.73
HMGCS1-205ENST00000508319 IGHA1P01876 353 aa10.51□□□□□ -0.73
HMGCS1-205ENST00000508319 ARG1P05089 322 aa10.51□□□□□ -0.73
HMGCS1-205ENST00000508319 CHRM2P08172 466 aa10.51□□□□□ -0.73
HMGCS1-205ENST00000508319 IGHV1-8P0DP01 117 aa10.51□□□□□ -0.73
HMGCS1-205ENST00000508319 EDDM3BP56851 147 aa10.51□□□□□ -0.73
HMGCS1-205ENST00000508319 CDC42P60953 191 aa10.51□□□□□ -0.73
HMGCS1-205ENST00000508319 TP53I3Q53FA7 332 aa10.51□□□□□ -0.73
HMGCS1-205ENST00000508319 PLA1AQ53H76 456 aa10.51□□□□□ -0.73
HMGCS1-205ENST00000508319 CCBE1Q6UXH8 406 aaPredicted RBP10.51□□□□□ -0.73
HMGCS1-205ENST00000508319 GDPD3Q7L5L3 318 aa10.51□□□□□ -0.73
HMGCS1-205ENST00000508319 FAM220AQ7Z4H9 259 aa10.51□□□□□ -0.73
HMGCS1-205ENST00000508319 RDH10Q8IZV5 341 aa10.51□□□□□ -0.73
HMGCS1-205ENST00000508319 OR11H6Q8NGC7 330 aa10.51□□□□□ -0.73
HMGCS1-205ENST00000508319 OR13D1Q8NGV5 346 aa10.51□□□□□ -0.73
HMGCS1-205ENST00000508319 PP6455Q8WZ26 134 aa10.51□□□□□ -0.73
HMGCS1-205ENST00000508319 RFKQ969G6 155 aa10.51□□□□□ -0.73
HMGCS1-205ENST00000508319 FOXRED1Q96CU9 486 aaPredicted RBP10.51□□□□□ -0.73
HMGCS1-205ENST00000508319 ADAT3Q96EY9 351 aaPredicted RBP10.51□□□□□ -0.73
HMGCS1-205ENST00000508319 ZNF702PQ9H963 129 aa10.51□□□□□ -0.73
HMGCS1-205ENST00000508319 TCF19Q9Y242 345 aa10.51□□□□□ -0.73
HMGCS1-205ENST00000508319 ATP5HO75947 161 aa10.5□□□□□ -0.73
HMGCS1-205ENST00000508319 INMTO95050 263 aa10.5□□□□□ -0.73
HMGCS1-205ENST00000508319 HAND1O96004 215 aa10.5□□□□□ -0.73
HMGCS1-205ENST00000508319 ATP6V1E1P36543 226 aa10.5□□□□□ -0.73
HMGCS1-205ENST00000508319 NPBWR2P48146 333 aa10.5□□□□□ -0.73
HMGCS1-205ENST00000508319 RBP2P50120 134 aa10.5□□□□□ -0.73
HMGCS1-205ENST00000508319 RAB13P51153 203 aa10.5□□□□□ -0.73
HMGCS1-205ENST00000508319 ZNF91Q05481 1191 aa10.5□□□□□ -0.73
HMGCS1-205ENST00000508319 EDDM3AQ14507 147 aa10.5□□□□□ -0.73
HMGCS1-205ENST00000508319 HABP2Q14520 560 aaPredicted RBP10.5□□□□□ -0.73
HMGCS1-205ENST00000508319 CNN3Q15417 329 aaKnown RBP10.5□□□□□ -0.73
HMGCS1-205ENST00000508319 Q8IYB0 196 aa10.5□□□□□ -0.73
HMGCS1-205ENST00000508319 C11orf44Q8N8P7 122 aa10.5□□□□□ -0.73
HMGCS1-205ENST00000508319 DNAAF1Q8NEP3 725 aa10.5□□□□□ -0.73
HMGCS1-205ENST00000508319 OR52N4Q8NGI2 321 aa10.5□□□□□ -0.73
HMGCS1-205ENST00000508319 OR2G2Q8NGZ5 317 aa10.5□□□□□ -0.73
HMGCS1-205ENST00000508319 EMG1Q92979 244 aaKnown RBP10.5□□□□□ -0.73
HMGCS1-205ENST00000508319 SNX22Q96L94 193 aa10.5□□□□□ -0.73
HMGCS1-205ENST00000508319 ZNF714Q96N38 554 aa10.5□□□□□ -0.73
HMGCS1-205ENST00000508319 ADI1Q9BV57 179 aa10.5□□□□□ -0.73
HMGCS1-205ENST00000508319 CHST6Q9GZX3 395 aa10.5□□□□□ -0.73
HMGCS1-205ENST00000508319 RBFOX1Q9NWB1 397 aaKnown RBP10.5□□□□□ -0.73
HMGCS1-205ENST00000508319 TRBV2A0A0J9YWF9 115 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 A6NDX4 124 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 E9PQ18 207 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 J3QRE1 110 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 PSPNO60542 156 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 SERPINA3P01011 423 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 ALPLP05186 524 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 VSIG10L2P0DP72 767 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 BCL3P20749 454 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 POU3F4P49335 361 aa10.49□□□□□ -0.73
HMGCS1-205ENST00000508319 NANOS3P60323 173 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms