RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 E5RGE8 158 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 H3BML4 177 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 DLEU1O43261 78 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 TNFSF12O43508 249 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 CTLA4P16410 223 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 ZNF93P35789 620 aaPredicted RBP11.15□□□□□ -0.62
DDR1-262ENST00000508312 CAPZBP47756 277 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 RAB11AP62491 216 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 RPL23AP62750 156 aaKnown RBP11.15□□□□□ -0.62
DDR1-262ENST00000508312 ZNF117Q03924 483 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 SMAD4Q13485 552 aaKnown RBP11.15□□□□□ -0.62
DDR1-262ENST00000508312 PPA1Q15181 289 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 FAM185AQ8N0U4 392 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 CARFQ8N187 725 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 TSTD1Q8NFU3 115 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 LMF2Q9BU23 707 aaKnown RBP11.15□□□□□ -0.62
DDR1-262ENST00000508312 LANCL2Q9NS86 450 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 NSG2Q9Y328 171 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 CFAP47Q6ZTR5 3102 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 CCDC187A0A096LP49 1063 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 CCDC163A0A0D9SF12 145 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 TMEM238LA0A1B0GVL6 79 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 A0A1W2PPC4 97 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 GDF9O60383 454 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 ZNF205O95201 554 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 MBPP02686 304 aaPredicted RBP11.15□□□□□ -0.62
DDR1-262ENST00000508312 MMP9P14780 707 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 PAX5Q02548 391 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 ACKR1Q16570 336 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 PCK2Q16822 640 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 PLAC9Q5JTB6 97 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 WBP2NLQ6ICG8 309 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 WDFY1Q8IWB7 410 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 TMEM183AQ8IXX5 376 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 LRRC75AQ8NAA5 344 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 OR5D18Q8NGL1 313 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 PTX4Q96A99 478 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 TBL1XR1Q9BZK7 514 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 GPR179Q6PRD1 2367 aa11.15□□□□□ -0.62
DDR1-262ENST00000508312 MAP1BP46821 2468 aaKnown RBP11.15□□□□□ -0.63
DDR1-262ENST00000508312 XKRY2A2RUG3 117 aa11.15□□□□□ -0.63
DDR1-262ENST00000508312 FAM221AA4D161 298 aa11.15□□□□□ -0.63
DDR1-262ENST00000508312 FIGNL2A6NMB9 653 aa11.15□□□□□ -0.63
DDR1-262ENST00000508312 TGOLN2O43493 480 aa11.15□□□□□ -0.63
DDR1-262ENST00000508312 RAD51DO75771 328 aa11.15□□□□□ -0.63
DDR1-262ENST00000508312 IL18BPO95998 194 aa11.15□□□□□ -0.63
DDR1-262ENST00000508312 SRP19P09132 144 aaKnown RBP11.15□□□□□ -0.63
DDR1-262ENST00000508312 PNLIPP16233 465 aa11.15□□□□□ -0.63
DDR1-262ENST00000508312 ZNF823P16415 610 aa11.15□□□□□ -0.63
DDR1-262ENST00000508312 IL12BP29460 328 aa11.15□□□□□ -0.63
DDR1-262ENST00000508312 MRPS21P82921 87 aaKnown RBP11.15□□□□□ -0.63
DDR1-262ENST00000508312 GLO1Q04760 184 aa11.15□□□□□ -0.63
DDR1-262ENST00000508312 PMS2P11Q13670 270 aa11.15□□□□□ -0.63
DDR1-262ENST00000508312 FDX2Q6P4F2 183 aa11.15□□□□□ -0.63
DDR1-262ENST00000508312 DCXRQ7Z4W1 244 aa11.15□□□□□ -0.63
DDR1-262ENST00000508312 CPEB2Q7Z5Q1 589 aaKnown RBP11.15□□□□□ -0.63
DDR1-262ENST00000508312 CUTCQ9NTM9 273 aa11.15□□□□□ -0.63
DDR1-262ENST00000508312 MED29Q9NX70 200 aa11.15□□□□□ -0.63
DDR1-262ENST00000508312 B3GALT1Q9Y5Z6 326 aa11.15□□□□□ -0.63
DDR1-262ENST00000508312 HSPB2A8KAH6 182 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 A8MVM7 634 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 FOLR1P15328 257 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 HIST1H1DP16402 221 aaKnown RBP11.14□□□□□ -0.63
DDR1-262ENST00000508312 BCKDHBP21953 392 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 ARL4DP49703 201 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 UCP2P55851 309 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 H3F3AP84243 136 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 ZNF141Q15928 474 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 HSPB2Q16082 182 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 RSPO4Q2I0M5 234 aaPredicted RBP11.14□□□□□ -0.63
DDR1-262ENST00000508312 VAX1Q5SQQ9 334 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 ATG4DQ86TL0 474 aaPredicted RBP11.14□□□□□ -0.63
DDR1-262ENST00000508312 OR52N5Q8NH56 324 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 ADAT3Q96EY9 351 aaPredicted RBP11.14□□□□□ -0.63
DDR1-262ENST00000508312 SHDQ96IW2 340 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 GINS3Q9BRX5 216 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 ELL3Q9HB65 397 aaPredicted RBP11.14□□□□□ -0.63
DDR1-262ENST00000508312 MRPS28Q9Y2Q9 187 aaKnown RBP11.14□□□□□ -0.63
DDR1-262ENST00000508312 COA3Q9Y2R0 106 aaPredicted RBP11.14□□□□□ -0.63
DDR1-262ENST00000508312 R4GMQ9 66 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 A0A087WWC5 75 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 ZNF217O75362 1048 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 BPNT1O95861 308 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 CEACAM6P40199 344 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 IDH3GP51553 393 aaPredicted RBP11.14□□□□□ -0.63
DDR1-262ENST00000508312 TDGF1P3P51864 188 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 SLC37A1P57057 533 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 HLA-DRB3P79483 266 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 FOXK1P85037 733 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 TMEM176BQ3YBM2 270 aaPredicted RBP11.14□□□□□ -0.63
DDR1-262ENST00000508312 WDR25Q64LD2 544 aaPredicted RBP11.14□□□□□ -0.63
DDR1-262ENST00000508312 SMRP1Q8NCR6 262 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 EMG1Q92979 244 aaKnown RBP11.14□□□□□ -0.63
DDR1-262ENST00000508312 TMEM59Q9BXS4 323 aa11.14□□□□□ -0.63
DDR1-262ENST00000508312 H2BFMP0C1H6 154 aa11.13□□□□□ -0.63
DDR1-262ENST00000508312 RPS2P15880 293 aaKnown RBP11.13□□□□□ -0.63
DDR1-262ENST00000508312 ZNF20P17024 532 aa11.13□□□□□ -0.63
DDR1-262ENST00000508312 VAMP2P63027 116 aa11.13□□□□□ -0.63
DDR1-262ENST00000508312 TSPO2Q5TGU0 170 aa11.13□□□□□ -0.63
DDR1-262ENST00000508312 HLA-DQA1Q5Y7H0 255 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms