RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 ACOT11Q8WXI4 607 aaPredicted RBP6.86□□□□□ -1.31
SCN1A-207ENST00000507401 THRSPQ92748 146 aa6.86□□□□□ -1.31
SCN1A-207ENST00000507401 DDOQ99489 341 aa6.86□□□□□ -1.31
SCN1A-207ENST00000507401 KRTAP4-12Q9BQ66 201 aa6.86□□□□□ -1.31
SCN1A-207ENST00000507401 MRPL37Q9BZE1 423 aaKnown RBP6.86□□□□□ -1.31
SCN1A-207ENST00000507401 BCL2L14Q9BZR8 327 aa6.86□□□□□ -1.31
SCN1A-207ENST00000507401 ARL6Q9H0F7 186 aa6.86□□□□□ -1.31
SCN1A-207ENST00000507401 DYNLRB1Q9NP97 96 aa6.86□□□□□ -1.31
SCN1A-207ENST00000507401 UFSP2Q9NUQ7 469 aa6.86□□□□□ -1.31
SCN1A-207ENST00000507401 TAS2R3Q9NYW6 316 aa6.86□□□□□ -1.31
SCN1A-207ENST00000507401 TVP23BQ9NYZ1 205 aa6.86□□□□□ -1.31
SCN1A-207ENST00000507401 H2AFY2Q9P0M6 372 aaPredicted RBP6.86□□□□□ -1.31
SCN1A-207ENST00000507401 METTL1Q9UBP6 276 aaKnown RBP6.86□□□□□ -1.31
SCN1A-207ENST00000507401 ZNF346Q9UL40 294 aaKnown RBP6.86□□□□□ -1.31
SCN1A-207ENST00000507401 FBN1P35555 2871 aaKnown RBP6.85□□□□□ -1.31
SCN1A-207ENST00000507401 IGLV3-9A0A075B6K5 115 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 A0A087WUU8 490 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 IGHV4-61A0A0C4DH41 118 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 TMEM238LA0A1B0GVL6 79 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 ANXA2P2A6NMY6 339 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 ZNF729A6NN14 1252 aaPredicted RBP6.85□□□□□ -1.31
SCN1A-207ENST00000507401 F5H5P2 479 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 PLPP2O43688 288 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 LMX1BO60663 402 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 APEHP13798 732 aaKnown RBP6.85□□□□□ -1.31
SCN1A-207ENST00000507401 CELP19835 753 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 CXCL2P19875 107 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 MAKP20794 623 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 GUCA1AP43080 201 aaPredicted RBP6.85□□□□□ -1.31
SCN1A-207ENST00000507401 HCCSP53701 268 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 UCP2P55851 309 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 CTXN1P60606 82 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 ZP1P60852 638 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 PCBD1P61457 104 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 TSPAN31Q12999 210 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 FHL1Q13642 323 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 NKPD1Q17RQ9 610 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 MSMPQ1L6U9 139 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 TBC1D28Q2M2D7 210 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 PAN3Q58A45 887 aaKnown RBP6.85□□□□□ -1.31
SCN1A-207ENST00000507401 FAM166AQ6J272 317 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 ZNF322Q6U7Q0 402 aaPredicted RBP6.85□□□□□ -1.31
SCN1A-207ENST00000507401 IL34Q6ZMJ4 242 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 TMEM91Q6ZNR0 172 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 C17orf107Q6ZR85 190 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 JAZF1Q86VZ6 243 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 NRMQ8IXM6 262 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 ZNF561Q8N587 486 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 ACBD7Q8N6N7 88 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 C15orf54Q8N8G6 183 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 CPEB3Q8NE35 698 aaKnown RBP6.85□□□□□ -1.31
SCN1A-207ENST00000507401 OR51A7Q8NH64 312 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 COQ8AQ8NI60 647 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 SYNPRQ8TBG9 265 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 TRMT10AQ8TBZ6 339 aaKnown RBP6.85□□□□□ -1.31
SCN1A-207ENST00000507401 TCTEX1D2Q8WW35 142 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 C11orf40Q8WZ69 217 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 TMEM203Q969S6 136 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 MSI2Q96DH6 328 aaKnown RBP6.85□□□□□ -1.31
SCN1A-207ENST00000507401 C1orf159Q96HA4 380 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 SEC11CQ9BY50 192 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 EGLN1Q9GZT9 426 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 CDH20Q9HBT6 801 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 GSN-AS1Q9NRJ2 163 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 PIPOXQ9P0Z9 390 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 OPN4Q9UHM6 478 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 DUSP13Q9UII6 198 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 TIMM10BQ9Y5J6 103 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 DMRT1Q9Y5R6 373 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 ETV7Q9Y603 341 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 RTTNQ86VV8 2226 aa6.85□□□□□ -1.31
SCN1A-207ENST00000507401 A0A0B4J203 849 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 KANTRA0A1W2PQU2 76 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 METTL21EPA6NDL7 271 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 ACOD1A6NK06 481 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 RFPL4AA6NLU0 287 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 C1orf196B1AJZ1 125 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 ZNF879B4DU55 563 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 RFPL4AL1F8VTS6 287 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 NDUFB6O95139 128 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 SLC2A10O95528 541 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 IFNA10P01566 189 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 IFNGP01579 166 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 RLN2P04090 185 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 CST2P09228 141 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 SLC25A4P12235 298 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 PAICSP22234 425 aaKnown RBP6.84□□□□□ -1.31
SCN1A-207ENST00000507401 ACHEP22303 614 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 TUBG1P23258 451 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 ADMP35318 185 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 APLNRP35414 380 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 CENPAP49450 140 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 EIF5AP63241 154 aaKnown RBP6.84□□□□□ -1.31
SCN1A-207ENST00000507401 SRSF4Q08170 494 aaKnown RBP6.84□□□□□ -1.31
SCN1A-207ENST00000507401 ECH1Q13011 328 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 RBMS2Q15434 407 aaKnown RBP6.84□□□□□ -1.31
SCN1A-207ENST00000507401 SGCAQ16586 387 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 PCGF3Q3KNV8 242 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 AADACL4Q5VUY2 407 aa6.84□□□□□ -1.31
SCN1A-207ENST00000507401 ZNF660Q6AZW8 331 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms