RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 CST11Q9H112 138 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 METTL9Q9H1A3 318 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 RAB9BQ9NP90 201 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 GPR173Q9NS66 373 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 NLKQ9UBE8 527 aa7.09□□□□□ -1.27
PDGFC-205ENST00000506880 VPS13CQ709C8 3753 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 ABCA2Q9BZC7 2435 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 A0A0G2JMP0 313 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 A0A0X1KG70 313 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 hCG_1809904A0A1W2PP81 198 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 A0A1W2PPE2 198 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 FAM230AA0A1W2PPH8 454 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 A0A1W2PR64 198 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 A0A1W2PRV1 198 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 OR2AT4A6NND4 320 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 CEACAM18A8MTB9 384 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 H7C1Q1 480 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 GABRPO00591 440 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 ENSAO43768 121 aaKnown RBP7.08□□□□□ -1.28
PDGFC-205ENST00000506880 MSMBP08118 114 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 RPS2P15880 293 aaKnown RBP7.08□□□□□ -1.28
PDGFC-205ENST00000506880 HNF1AP20823 631 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 PSMB9P28065 219 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 ERP29P30040 261 aaKnown RBP7.08□□□□□ -1.28
PDGFC-205ENST00000506880 CARTPTQ16568 116 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 ODF4Q2M2E3 257 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 DDI2Q5TDH0 399 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 FAM166AQ6J272 317 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 ZNF788Q6ZQV5 615 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 OR2W3Q7Z3T1 314 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 CEACAM19Q7Z692 300 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 GLCCI1Q86VQ1 547 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 LYPD6Q86Y78 171 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 FAM58AQ8N1B3 248 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 KIR3DL3Q8N743 410 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 OR4M2Q8NGB6 313 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 OR10AC1Q8NH08 325 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 KCTD7Q96MP8 289 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 GPER1Q99527 375 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 TMEM246Q9BRR3 403 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 SSBP3Q9BWW4 388 aaPredicted RBP7.08□□□□□ -1.28
PDGFC-205ENST00000506880 SMURF1Q9HCE7 757 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 HMG20AQ9NP66 347 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 NOX4Q9NPH5 578 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 UFSP2Q9NUQ7 469 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 TREM2Q9NZC2 230 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 CLN8Q9UBY8 286 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 OR5V1Q9UGF6 321 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 ITGB1BP2Q9UKP3 347 aa7.08□□□□□ -1.28
PDGFC-205ENST00000506880 IGHV4-61A0A0C4DH41 118 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 ISPDA4D126 451 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 RNF223E7ERA6 249 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.07□□□□□ -1.28
PDGFC-205ENST00000506880 SLC17A2O00624 439 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 SH2D1BO14796 132 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 SLC22A1O15245 554 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 NDUFB3O43676 98 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 CSTBP04080 98 aaKnown RBP7.07□□□□□ -1.28
PDGFC-205ENST00000506880 GTF2F2P13984 249 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 PITPNBP48739 271 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 GNB2P62879 340 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 MEF2CQ06413 473 aaPredicted RBP7.07□□□□□ -1.28
PDGFC-205ENST00000506880 RSU1Q15404 277 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 SSX1Q16384 188 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 DGUOKQ16854 277 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 TMEM30BQ3MIR4 351 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 PRAMEF6Q5VXH4 476 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 BTNL3Q6UXE8 466 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 TMEM91Q6ZNR0 172 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 SLC25A26Q70HW3 274 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 ZNF554Q86TJ5 538 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 KCNG3Q8TAE7 436 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 ZNF420Q8TAQ5 688 aaPredicted RBP7.07□□□□□ -1.28
PDGFC-205ENST00000506880 RPL3LQ92901 407 aaKnown RBP7.07□□□□□ -1.28
PDGFC-205ENST00000506880 SNX22Q96L94 193 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 TMED9Q9BVK6 235 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 UNKLQ9H9P5 680 aaKnown RBP7.07□□□□□ -1.28
PDGFC-205ENST00000506880 TAS2R4Q9NYW5 299 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 ZNF222Q9UK12 451 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 CDC42EP3Q9UKI2 254 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 KCNS2Q9ULS6 477 aa7.07□□□□□ -1.28
PDGFC-205ENST00000506880 ZNF469Q96JG9 3925 aaPredicted RBP7.07□□□□□ -1.28
PDGFC-205ENST00000506880 SONP18583 2426 aaKnown RBP7.06□□□□□ -1.28
PDGFC-205ENST00000506880 IGKV1-27A0A075B6S5 117 aa7.06□□□□□ -1.28
PDGFC-205ENST00000506880 K7N7A8 449 aa7.06□□□□□ -1.28
PDGFC-205ENST00000506880 M0R1W7 72 aa7.06□□□□□ -1.28
PDGFC-205ENST00000506880 PIN1P1O15428 100 aa7.06□□□□□ -1.28
PDGFC-205ENST00000506880 LY6HO94772 140 aa7.06□□□□□ -1.28
PDGFC-205ENST00000506880 CYB5R3P00387 301 aaPredicted RBP7.06□□□□□ -1.28
PDGFC-205ENST00000506880 IGHV4-31P0DP07 118 aa7.06□□□□□ -1.28
PDGFC-205ENST00000506880 TMEM225BP0DP42 221 aa7.06□□□□□ -1.28
PDGFC-205ENST00000506880 PSG2P11465 335 aa7.06□□□□□ -1.28
PDGFC-205ENST00000506880 MAP2K4P45985 399 aa7.06□□□□□ -1.28
PDGFC-205ENST00000506880 RPL5P46777 297 aaKnown RBP7.06□□□□□ -1.28
PDGFC-205ENST00000506880 SOX2P48431 317 aa7.06□□□□□ -1.28
PDGFC-205ENST00000506880 FABP5Q01469 135 aa7.06□□□□□ -1.28
PDGFC-205ENST00000506880 RBM39Q14498 530 aaKnown RBP7.06□□□□□ -1.28
PDGFC-205ENST00000506880 WDR25Q64LD2 544 aaPredicted RBP7.06□□□□□ -1.28
PDGFC-205ENST00000506880 ASPHD2Q6ICH7 369 aa7.06□□□□□ -1.28
PDGFC-205ENST00000506880 METAP1DQ6UB28 335 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms