RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 CRHP06850 196 aa14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 ZNF14P17017 642 aaPredicted RBP14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 COX5AP20674 150 aa14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 HOXC12P31275 282 aa14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 GNG3P63215 75 aa14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 C3P1Q6ZMU1 363 aa14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 RFPL4BQ6ZWI9 263 aa14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 C1orf174Q8IYL3 243 aa14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 HPSE2Q8WWQ2 592 aa14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 OR5P3Q8WZ94 311 aa14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 ARHGAP21Q5T5U3 1957 aa14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 MUC3AQ02505 3323 aa14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 TRAPPC2LH3BP13 241 aa14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 CTSDP07339 412 aaPredicted RBP14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 SFTPBP07988 381 aa14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 IGHV1-2P23083 117 aa14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 PTGER4P35408 488 aa14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 WNT5AP41221 380 aa14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 NPY4RP50391 375 aa14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 ZNF345Q14585 488 aa14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 DHRS11Q6UWP2 260 aa14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 ADAD2Q8NCV1 583 aaKnown RBP14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 GTF3AQ92664 365 aaKnown RBP14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 FAAP24Q9BTP7 215 aa14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 RIMS4Q9H426 269 aaPredicted RBP14.86□□□□□ -0.03
TRAPPC11-204ENST00000505676 FXYD6-FXYD2A0A087WZ82 144 aa14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 OR5H14A6NHG9 310 aa14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 PROB1E7EW31 1015 aa14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 RP2O75695 350 aa14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 CXCL2P19875 107 aa14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 ACSF3Q4G176 576 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 GSG1LQ6UXU4 331 aa14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 CALHM1Q8IU99 346 aa14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 VRK1Q99986 396 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 SULT4A1Q9BR01 284 aa14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 NMES1Q9C002 83 aa14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 FXYD6Q9H0Q3 95 aa14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 ZNF407Q9C0G0 2248 aa14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 ZNF732B4DXR9 585 aa14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 NGFP01138 241 aa14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 CCL2P13500 99 aa14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 CBR1P16152 277 aa14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 HAAOP46952 286 aa14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 RAB14P61106 215 aa14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 IL24Q13007 206 aa14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 IL13RA2Q14627 380 aa14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 GABRA6Q16445 453 aa14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 PIGYQ3MUY2 71 aa14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 C1QTNF12Q5T7M4 302 aa14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 DPCDQ9BVM2 203 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 ZNF230Q9UIE0 474 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC11-204ENST00000505676 ARPC5O15511 151 aa14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 OR2F2O95006 317 aa14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 PGAM2P15259 253 aa14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 SSTR2P30874 369 aa14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 SORDQ00796 357 aa14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 OR2F1Q13607 317 aa14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 HLXQ14774 488 aaPredicted RBP14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 CLLU1Q5K131 121 aa14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 C11orf87Q6NUJ2 197 aa14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 Q6ZS92 163 aa14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 TMUB2Q71RG4 321 aa14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 RTBDNQ9BSG5 229 aaPredicted RBP14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 PLSCR4Q9NRQ2 329 aa14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 RCC2Q9P258 522 aaKnown RBP14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 DNAJC13O75165 2243 aa14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 FRYLO94915 3013 aa14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 CRYABP02511 175 aaKnown RBP14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 OR5H8P0DN80 308 aa14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 RAC2P15153 192 aa14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 GPM6AP51674 278 aa14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 UCP3P55916 312 aa14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 Q8IYB0 196 aa14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 CASTOR1Q8WTX7 329 aa14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 TMEM230Q96A57 120 aa14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 MICU1Q9BPX6 476 aa14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 RTL8AQ9BWD3 113 aa14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 MFFQ9GZY8 342 aa14.84□□□□□ -0.03
TRAPPC11-204ENST00000505676 LINC00862A6NCI5 91 aa14.83□□□□□ -0.04
TRAPPC11-204ENST00000505676 NOS1APO75052 506 aaPredicted RBP14.83□□□□□ -0.04
TRAPPC11-204ENST00000505676 OR7C1O76099 320 aaPredicted RBP14.83□□□□□ -0.04
TRAPPC11-204ENST00000505676 MPC2O95563 127 aa14.83□□□□□ -0.04
TRAPPC11-204ENST00000505676 GLP1RP43220 463 aa14.83□□□□□ -0.04
TRAPPC11-204ENST00000505676 KIR2DL2P43627 348 aaPredicted RBP14.83□□□□□ -0.04
TRAPPC11-204ENST00000505676 PRSS12P56730 875 aa14.83□□□□□ -0.04
TRAPPC11-204ENST00000505676 EXOSC2Q13868 293 aaKnown RBP14.83□□□□□ -0.04
TRAPPC11-204ENST00000505676 P2RY6Q15077 328 aa14.83□□□□□ -0.04
TRAPPC11-204ENST00000505676 ZNF660Q6AZW8 331 aaPredicted RBP14.83□□□□□ -0.04
TRAPPC11-204ENST00000505676 FAM169BQ8N8A8 192 aa14.83□□□□□ -0.04
TRAPPC11-204ENST00000505676 PIK3IP1Q96FE7 263 aa14.83□□□□□ -0.04
TRAPPC11-204ENST00000505676 ZNF2Q9BSG1 426 aaPredicted RBP14.83□□□□□ -0.04
TRAPPC11-204ENST00000505676 LRFN3Q9BTN0 628 aa14.83□□□□□ -0.04
TRAPPC11-204ENST00000505676 ZNF442Q9H7R0 627 aa14.83□□□□□ -0.04
TRAPPC11-204ENST00000505676 IFT22Q9H7X7 185 aa14.83□□□□□ -0.04
TRAPPC11-204ENST00000505676 A0A0C4DFX4 3053 aa14.83□□□□□ -0.04
TRAPPC11-204ENST00000505676 TRAV14DV4A0A0A6YYC5 116 aa14.82□□□□□ -0.04
TRAPPC11-204ENST00000505676 MBD3L4A6NDZ8 208 aaPredicted RBP14.82□□□□□ -0.04
TRAPPC11-204ENST00000505676 MBD3L3A6NE82 208 aaPredicted RBP14.82□□□□□ -0.04
TRAPPC11-204ENST00000505676 MBD3L5A6NJ08 208 aaPredicted RBP14.82□□□□□ -0.04
TRAPPC11-204ENST00000505676 SMPD2O60906 423 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms