RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 OMPP47874 163 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RAB7AP51149 207 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PSMD7P51665 324 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 LSM6P62312 80 aaKnown RBP3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RPS24P62847 133 aaKnown RBP3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SLC25A11Q02978 314 aaKnown RBP3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TGFBR3Q03167 851 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CD164Q04900 197 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SRSF6Q13247 344 aaKnown RBP3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TRIP13Q15645 432 aaPredicted RBP3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 NRF1Q16656 503 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SPIN3Q5JUX0 258 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 BRMS1LQ5PSV4 323 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 FAM27D1Q5T7N8 215 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TMEM215Q68D42 235 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 FBXL22Q6P050 247 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 MED27Q6P2C8 311 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 Q6ZN92 141 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SMIM15Q7Z3B0 74 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 HOGA1Q86XE5 327 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RAB42Q8N4Z0 105 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SUMF1Q8NBK3 374 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TMEM178AQ8NBL3 297 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ZNRF1Q8ND25 227 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 OR2A1Q8NGT9 310 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CCDC26Q8TAB7 109 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 WFDC5Q8TCV5 224 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ADAMTS16Q8TE57 1224 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RXFP2Q8WXD0 754 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 NTAN1Q96AB6 310 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CREB3L1Q96BA8 519 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ZNF524Q96C55 264 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SMIM19Q96E16 107 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CEP19Q96LK0 163 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 Q96MT0 163 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 MCEEQ96PE7 176 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PPP1R2P1Q96PQ5 205 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 DUX3Q96PT4 197 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 VAT1Q99536 393 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PRRT1Q99946 306 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PDCD1LG2Q9BQ51 273 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 HCAR1Q9BXC0 346 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CHIAQ9BZP6 476 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 BCL2L14Q9BZR8 327 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 REEP1Q9H902 201 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 FBXO6Q9NRD1 293 aaPredicted RBP3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PLCXD1Q9NUJ7 323 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 EXD2Q9NVH0 621 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 DDIT4Q9NX09 232 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 IL17CQ9P0M4 197 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 MLXQ9UH92 298 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CES1P1Q9UKY3 287 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RARRES3Q9UL19 164 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 AP3M1Q9Y2T2 418 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ARL2BPQ9Y2Y0 163 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SNX10Q9Y5X0 201 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CACNA1EQ15878 2313 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 EML5Q05BV3 1969 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CHD5Q8TDI0 1954 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 MUC22E2RYF6 1773 aaPredicted RBP3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CABIN1Q9Y6J0 2220 aa3.38□□□□□ -1.87
PDLIM1P4-201ENST00000504327 NUP205Q92621 2012 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TPRP12270 2363 aaKnown RBP3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 IGHV3-20A0A0C4DH32 117 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ISPDA4D126 451 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PMS2P5A8MQ11 134 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 K7EQD1 137 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CDIPTO14735 213 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 FABP7O15540 132 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SLC16A7O60669 478 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TBL1XO60907 577 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TRMUO75648 421 aaKnown RBP3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SCRG1O75711 98 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 GLSO94925 669 aaPredicted RBP3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SLC2A10O95528 541 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 KLF8O95600 359 aaPredicted RBP3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 KRT75O95678 551 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SERPINA1P01009 418 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 APODP05090 189 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 OR5AL1P0C617 328 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RBMY1CP0DJD4 496 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PAX1P15863 534 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 UGT2B7P16662 529 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 HTR1DP28221 377 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CD70P32970 193 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 MAGEA12P43365 314 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 GSK3BP49841 420 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 AQP5P55064 265 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 BIDP55957 195 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 OR10A3P58181 314 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RAB4BP61018 213 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RPL18AQ02543 176 aaKnown RBP3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ZNF92Q03936 586 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 OR7A5Q15622 319 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CNPY1Q3B7I2 92 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 NSUN5P1Q3KNT7 163 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TTLL9Q3SXZ7 439 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TFDP3Q5H9I0 405 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 WDR38Q5JTN6 314 aa3.37□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PWWP2BQ6NUJ5 590 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms