RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 PSG4Q00888 419 aa10.07□□□□□ -0.8
USP46-204ENST00000503060 HGFACQ04756 655 aa10.07□□□□□ -0.8
USP46-204ENST00000503060 UBE2V2Q15819 145 aa10.07□□□□□ -0.8
USP46-204ENST00000503060 ESCO2Q56NI9 601 aa10.07□□□□□ -0.8
USP46-204ENST00000503060 C9orf152Q5JTZ5 239 aa10.07□□□□□ -0.8
USP46-204ENST00000503060 TSPO2Q5TGU0 170 aa10.07□□□□□ -0.8
USP46-204ENST00000503060 CRIP3Q6Q6R5 217 aa10.07□□□□□ -0.8
USP46-204ENST00000503060 SLC16A14Q7RTX9 510 aa10.07□□□□□ -0.8
USP46-204ENST00000503060 SKA3Q8IX90 412 aa10.07□□□□□ -0.8
USP46-204ENST00000503060 SPICQ8N5J4 248 aa10.07□□□□□ -0.8
USP46-204ENST00000503060 FGFBP3Q8TAT2 258 aa10.07□□□□□ -0.8
USP46-204ENST00000503060 NICN1Q9BSH3 213 aa10.07□□□□□ -0.8
USP46-204ENST00000503060 OR2H1Q9GZK4 316 aa10.07□□□□□ -0.8
USP46-204ENST00000503060 PCDHB16Q9NRJ7 776 aa10.07□□□□□ -0.8
USP46-204ENST00000503060 SCP2D1Q9UJQ7 156 aa10.07□□□□□ -0.8
USP46-204ENST00000503060 MED13Q9UHV7 2174 aa10.07□□□□□ -0.8
USP46-204ENST00000503060 SPAARA0A1B0GVQ0 90 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 KLRC4-KLRK1H3BQV0 150 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 SAP30O75446 220 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 AMY2AP04746 511 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 ITGB2P05107 769 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 GNB3P16520 340 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 HTR5AP47898 357 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 SNRPD2P62316 118 aaKnown RBP10.06□□□□□ -0.8
USP46-204ENST00000503060 KISS1Q15726 138 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 DMRTC1Q5HYR2 192 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 CHMP1BQ7LBR1 199 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 PNLDC1Q8NA58 520 aaKnown RBP10.06□□□□□ -0.8
USP46-204ENST00000503060 OR52B4Q8NGK2 314 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 NPRL2Q8WTW4 380 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 NUDCD2Q8WVJ2 157 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 TMEM59Q9BXS4 323 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 LINC00470Q9BZP3 86 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 BANF2Q9H503 90 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 CACNA1HO95180 2353 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 A0A1W2PP11 408 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 IGHV3-9P01782 118 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 RPL35P42766 123 aaKnown RBP10.06□□□□□ -0.8
USP46-204ENST00000503060 PPIAP62937 165 aaKnown RBP10.06□□□□□ -0.8
USP46-204ENST00000503060 PLXDC2Q6UX71 529 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 BPIFB2Q8N4F0 458 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 FAM89BQ8N5H3 189 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 OR4S1Q8NGB4 309 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 OR11H4Q8NGC9 324 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 OR2AE1Q8NHA4 323 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 ZNF431Q8TF32 576 aaPredicted RBP10.06□□□□□ -0.8
USP46-204ENST00000503060 RAB1CQ92928 201 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 REEP6Q96HR9 211 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 UPB1Q9UBR1 384 aa10.06□□□□□ -0.8
USP46-204ENST00000503060 MCTS1Q9ULC4 181 aaKnown RBP10.06□□□□□ -0.8
USP46-204ENST00000503060 DHRS7CA6NNS2 312 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 CDRT15L2A8MXV6 281 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 FARS2O95363 451 aaKnown RBP10.05□□□□□ -0.8
USP46-204ENST00000503060 LCATP04180 440 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 DNASE1P24855 282 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 PTGFRP43088 359 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 AKR1D1P51857 326 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 MEF2DQ14814 521 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 NRN1LQ496H8 165 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 SLC22A6Q4U2R8 563 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 RTN4RL2Q86UN3 420 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 SEMA6DQ8NFY4 1073 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 OR10A7Q8NGE5 316 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 SLC25A21Q9BQT8 299 aaPredicted RBP10.05□□□□□ -0.8
USP46-204ENST00000503060 SLC7A10Q9NS82 523 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 PGPEP1Q9NXJ5 209 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 GHRLQ9UBU3 117 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 A0A1W2PPQ1 181 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 UBE2QL1A1L167 161 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 DISC1C4P0D8 188 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 SOCS1O15524 211 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 ZNF780AO75290 641 aaPredicted RBP10.05□□□□□ -0.8
USP46-204ENST00000503060 MMP7P09237 267 aaPredicted RBP10.05□□□□□ -0.8
USP46-204ENST00000503060 FCGR2AP12318 317 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 ACKR3P25106 362 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 RGS7BPQ6MZT1 257 aaPredicted RBP10.05□□□□□ -0.8
USP46-204ENST00000503060 VHLLQ6RSH7 139 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 C1QL2Q7Z5L3 287 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.05□□□□□ -0.8
USP46-204ENST00000503060 ZNF561Q8N587 486 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 GVQW1Q8N7I0 195 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 ZFP62Q8NB50 900 aaPredicted RBP10.05□□□□□ -0.8
USP46-204ENST00000503060 OR56B1Q8NGI3 324 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 OR2T35Q8NGX2 323 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 FNDC9Q8TBE3 224 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 TNFAIP8L1Q8WVP5 186 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 PIGTQ969N2 578 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 RAB3CQ96E17 227 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 SLC6A7Q99884 636 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 URM1Q9BTM9 101 aaKnown RBP10.05□□□□□ -0.8
USP46-204ENST00000503060 PRRG4Q9BZD6 226 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 CHST6Q9GZX3 395 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 CST11Q9H112 138 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 PPA2Q9H2U2 334 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 CALHM2Q9HA72 323 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 CA10Q9NS85 328 aa10.05□□□□□ -0.8
USP46-204ENST00000503060 ZNF724A8MTY0 619 aa10.04□□□□□ -0.8
USP46-204ENST00000503060 LRP3O75074 770 aa10.04□□□□□ -0.8
USP46-204ENST00000503060 RRADP55042 308 aa10.04□□□□□ -0.8
USP46-204ENST00000503060 TMEM50BP56557 158 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms