RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 MYO7BQ6PIF6 2116 aa14.35□□□□□ -0.11
VCAN-204ENST00000502527 FRYLO94915 3013 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 NCKAP5O14513 1909 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 NEURL1O76050 574 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 IGHV3-9P01782 118 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 DEFA5Q01523 94 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 MALLQ13021 153 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 CPEB3Q8NE35 698 aaKnown RBP14.34□□□□□ -0.11
VCAN-204ENST00000502527 ARL11Q969Q4 196 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 LRRC46Q96FV0 321 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 POM121Q96HA1 1249 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 GPR87Q9BY21 358 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 ZNF703Q9H7S9 590 aaPredicted RBP14.34□□□□□ -0.11
VCAN-204ENST00000502527 ABI3Q9P2A4 366 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 PDCD6O75340 191 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 ATF4P18848 351 aaPredicted RBP14.34□□□□□ -0.11
VCAN-204ENST00000502527 LHX2P50458 406 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 PIGPP57054 158 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 SMCO1Q147U7 214 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 ABCA11PQ4W5N1 156 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 COLCA1Q6ZS62 124 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 DEFB123Q8N688 67 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 BOLLQ8N9W6 283 aaKnown RBP14.34□□□□□ -0.11
VCAN-204ENST00000502527 NAXEQ8NCW5 288 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 TOMM40LQ969M1 308 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 ARRDC1-AS1Q9H2J1 176 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 LIME1Q9H400 295 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 ZNF286AQ9HBT8 521 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 ZC4H2Q9NQZ6 224 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 TUBD1Q9UJT1 453 aa14.34□□□□□ -0.11
VCAN-204ENST00000502527 COL27A1Q8IZC6 1860 aaPredicted RBP14.33□□□□□ -0.12
VCAN-204ENST00000502527 ZNF708P17019 499 aa14.33□□□□□ -0.12
VCAN-204ENST00000502527 PMELP40967 661 aa14.33□□□□□ -0.12
VCAN-204ENST00000502527 RBM11P57052 281 aaKnown RBP14.33□□□□□ -0.12
VCAN-204ENST00000502527 ARF1P84077 181 aaKnown RBP14.33□□□□□ -0.12
VCAN-204ENST00000502527 SRYQ05066 204 aa14.33□□□□□ -0.12
VCAN-204ENST00000502527 GGNBP1Q5YKI7 109 aa14.33□□□□□ -0.12
VCAN-204ENST00000502527 EIF5AL1Q6IS14 154 aaKnown RBP14.33□□□□□ -0.12
VCAN-204ENST00000502527 SLC22A25Q6T423 547 aa14.33□□□□□ -0.12
VCAN-204ENST00000502527 ATRAIDQ6UW56 229 aa14.33□□□□□ -0.12
VCAN-204ENST00000502527 SIGLEC12Q96PQ1 595 aa14.33□□□□□ -0.12
VCAN-204ENST00000502527 SLC7A10Q9NS82 523 aa14.33□□□□□ -0.12
VCAN-204ENST00000502527 PCSK5Q92824 1860 aa14.33□□□□□ -0.12
VCAN-204ENST00000502527 VPS13AQ96RL7 3174 aa14.33□□□□□ -0.12
VCAN-204ENST00000502527 CNTRLQ7Z7A1 2325 aa14.32□□□□□ -0.12
VCAN-204ENST00000502527 C21orf140B9A014 251 aa14.32□□□□□ -0.12
VCAN-204ENST00000502527 ZNF587BE7ETH6 402 aa14.32□□□□□ -0.12
VCAN-204ENST00000502527 SYNGR4O95473 234 aa14.32□□□□□ -0.12
VCAN-204ENST00000502527 FAM157CP0CG43 387 aa14.32□□□□□ -0.12
VCAN-204ENST00000502527 HKR1P10072 659 aa14.32□□□□□ -0.12
VCAN-204ENST00000502527 TMEM164Q5U3C3 297 aa14.32□□□□□ -0.12
VCAN-204ENST00000502527 BRICD5Q6PL45 260 aa14.32□□□□□ -0.12
VCAN-204ENST00000502527 TMEM200AQ86VY9 491 aa14.32□□□□□ -0.12
VCAN-204ENST00000502527 FOXRED2Q8IWF2 684 aa14.32□□□□□ -0.12
VCAN-204ENST00000502527 DYRK2Q92630 601 aa14.32□□□□□ -0.12
VCAN-204ENST00000502527 GALNT14Q96FL9 552 aa14.32□□□□□ -0.12
VCAN-204ENST00000502527 NAA60Q9H7X0 242 aa14.32□□□□□ -0.12
VCAN-204ENST00000502527 C12orf4Q9NQ89 552 aa14.32□□□□□ -0.12
VCAN-204ENST00000502527 OR2S2Q9NQN1 319 aa14.32□□□□□ -0.12
VCAN-204ENST00000502527 FOXJ2Q9P0K8 574 aa14.32□□□□□ -0.12
VCAN-204ENST00000502527 RPL36A-HNRNPH2H7BZ11 118 aa14.32□□□□□ -0.12
VCAN-204ENST00000502527 FUT3P21217 361 aa14.32□□□□□ -0.12
VCAN-204ENST00000502527 RFC3P40938 356 aa14.32□□□□□ -0.12
VCAN-204ENST00000502527 CLDN18P56856 261 aa14.32□□□□□ -0.12
VCAN-204ENST00000502527 TMEM211Q6ICI0 200 aa14.32□□□□□ -0.12
VCAN-204ENST00000502527 FAM219AQ8IW50 185 aa14.32□□□□□ -0.12
VCAN-204ENST00000502527 RTN4IP1Q8WWV3 396 aaPredicted RBP14.32□□□□□ -0.12
VCAN-204ENST00000502527 MRPL24Q96A35 216 aaKnown RBP14.32□□□□□ -0.12
VCAN-204ENST00000502527 TMEM218A2RU14 115 aa14.31□□□□□ -0.12
VCAN-204ENST00000502527 FAM221AA4D161 298 aa14.31□□□□□ -0.12
VCAN-204ENST00000502527 K7EPK0 472 aa14.31□□□□□ -0.12
VCAN-204ENST00000502527 DEDDO75618 318 aa14.31□□□□□ -0.12
VCAN-204ENST00000502527 CELA3AP09093 270 aa14.31□□□□□ -0.12
VCAN-204ENST00000502527 FCGR2CP31995 323 aa14.31□□□□□ -0.12
VCAN-204ENST00000502527 OR1C1Q15619 314 aa14.31□□□□□ -0.12
VCAN-204ENST00000502527 CALHM1Q8IU99 346 aa14.31□□□□□ -0.12
VCAN-204ENST00000502527 FAM71E2Q8N5Q1 922 aa14.31□□□□□ -0.12
VCAN-204ENST00000502527 ZNF611Q8N823 705 aa14.31□□□□□ -0.12
VCAN-204ENST00000502527 ADAMTS17Q8TE56 1095 aa14.31□□□□□ -0.12
VCAN-204ENST00000502527 SUCNR1Q9BXA5 334 aa14.31□□□□□ -0.12
VCAN-204ENST00000502527 LPAR3Q9UBY5 353 aa14.31□□□□□ -0.12
VCAN-204ENST00000502527 ZNF705EA8MWA4 302 aaPredicted RBP14.3□□□□□ -0.12
VCAN-204ENST00000502527 RPL12P30050 165 aaKnown RBP14.3□□□□□ -0.12
VCAN-204ENST00000502527 GLP1RP43220 463 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 UCP3P55916 312 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 FXYD4P59646 89 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 TMEM187Q14656 261 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 SLC25A26Q70HW3 274 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 TUSC5Q8IXB3 177 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 SAT2Q96F10 170 aaPredicted RBP14.3□□□□□ -0.12
VCAN-204ENST00000502527 MARS2Q96GW9 593 aaKnown RBP14.3□□□□□ -0.12
VCAN-204ENST00000502527 SYT3Q9BQG1 590 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 ZNF442Q9H7R0 627 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 CALHM2Q9HA72 323 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 TAF9BQ9HBM6 251 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 MMP26Q9NRE1 261 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 A0A096LPE4 126 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 A0A1W2PPZ6 126 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 FAM90A10PA6NDY2 464 aa14.3□□□□□ -0.12
VCAN-204ENST00000502527 FAM90A18PA6NE21 464 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms