RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.24□□□□□ -0.93
CDK9-205ENST00000498339 GTF2A1LQ9UNN4 478 aa9.24□□□□□ -0.93
CDK9-205ENST00000498339 LINC00312Q9Y6C7 94 aa9.24□□□□□ -0.93
CDK9-205ENST00000498339 A0A0U1RQV5 110 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 TMEM269A0A1B0GVZ9 245 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 SERPINE3A8MV23 424 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 LEUTXA8MZ59 168 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 SEC14L6B5MCN3 397 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 CCL24O00175 119 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 TNFRSF11BO00300 401 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 NOS1APO75052 506 aaPredicted RBP9.23□□□□□ -0.93
CDK9-205ENST00000498339 INMTO95050 263 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 CCNB2O95067 398 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 SEMG1P04279 462 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 AMY1AP04745 511 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 AMY2AP04746 511 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 GABRR1P24046 479 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 MNDAP41218 407 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 PSME3P61289 254 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 MEF2CQ06413 473 aaPredicted RBP9.23□□□□□ -0.93
CDK9-205ENST00000498339 RBM39Q14498 530 aaKnown RBP9.23□□□□□ -0.93
CDK9-205ENST00000498339 GRK1Q15835 563 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 DEFB136Q30KP8 78 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 PRAMEF5Q5TYX0 476 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 C8orf82Q6P1X6 216 aaPredicted RBP9.23□□□□□ -0.93
CDK9-205ENST00000498339 TRPM8Q7Z2W7 1104 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 ABHD12Q8N2K0 398 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 ZNF454Q8N9F8 522 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 TEX47Q8TBZ9 253 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 OR51E1Q8TCB6 317 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 RAX2Q96IS3 184 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 HES4Q9HCC6 221 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 SPAG4Q9NPE6 437 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 CMC2Q9NRP2 79 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 ABCD2Q9UBJ2 740 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 LINC00527Q9UJ94 153 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 LAMP5Q9UJQ1 280 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 ZNF256Q9Y2P7 627 aaPredicted RBP9.23□□□□□ -0.93
CDK9-205ENST00000498339 SMAD5-AS1Q9Y6J3 95 aa9.23□□□□□ -0.93
CDK9-205ENST00000498339 TOR1AO14656 332 aa9.22□□□□□ -0.93
CDK9-205ENST00000498339 ZNF737O75373 536 aa9.22□□□□□ -0.93
CDK9-205ENST00000498339 KRT36O76013 467 aa9.22□□□□□ -0.93
CDK9-205ENST00000498339 GASTP01350 101 aa9.22□□□□□ -0.93
CDK9-205ENST00000498339 SNRNP70P08621 437 aaKnown RBP9.22□□□□□ -0.93
CDK9-205ENST00000498339 ATP6V1B1P15313 513 aa9.22□□□□□ -0.93
CDK9-205ENST00000498339 PEX2P28328 305 aa9.22□□□□□ -0.93
CDK9-205ENST00000498339 CEACAM3P40198 252 aa9.22□□□□□ -0.93
CDK9-205ENST00000498339 HES1Q14469 280 aa9.22□□□□□ -0.93
CDK9-205ENST00000498339 CLVS2Q5SYC1 327 aa9.22□□□□□ -0.93
CDK9-205ENST00000498339 LCN1P1Q5VSP4 162 aa9.22□□□□□ -0.93
CDK9-205ENST00000498339 CCDC144NLQ6NUI1 221 aa9.22□□□□□ -0.93
CDK9-205ENST00000498339 HACD2Q6Y1H2 254 aa9.22□□□□□ -0.93
CDK9-205ENST00000498339 ANGPTL5Q86XS5 388 aa9.22□□□□□ -0.93
CDK9-205ENST00000498339 IQCF1Q8N6M8 205 aa9.22□□□□□ -0.93
CDK9-205ENST00000498339 SNX22Q96L94 193 aa9.22□□□□□ -0.93
CDK9-205ENST00000498339 NSMCE2Q96MF7 247 aa9.22□□□□□ -0.93
CDK9-205ENST00000498339 PBOV1Q9GZY1 135 aa9.22□□□□□ -0.93
CDK9-205ENST00000498339 ZMAT4Q9H898 229 aa9.22□□□□□ -0.93
CDK9-205ENST00000498339 MAGEL2Q9UJ55 1249 aa9.22□□□□□ -0.93
CDK9-205ENST00000498339 KLHDC2Q9Y2U9 406 aa9.22□□□□□ -0.93
CDK9-205ENST00000498339 FAM230AA0A1W2PPH8 454 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 A6NIN4 97 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 H3BN98 237 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 MMP23AO75900 390 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 DHRS3O75911 302 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 FAM106CPP0CH98 169 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 RPS7P62081 194 aaKnown RBP9.21□□□□□ -0.94
CDK9-205ENST00000498339 TPTE2P1Q5T6R2 138 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 SLX4IPQ5VYV7 408 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 OR52W1Q6IF63 320 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 CGB2Q6NT52 195 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 BAIAP2L2Q6UXY1 529 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 ADAMTSL5Q6ZMM2 481 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 OVCH2Q7RTZ1 564 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 RTN4RL2Q86UN3 420 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 SBSPONQ8IVN8 264 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 COMMD1Q8N668 190 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 OR8U1Q8NH10 309 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 SLAMF9Q96A28 289 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 CEP19Q96LK0 163 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 TEAD3Q99594 435 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 TTTY10Q9BZA0 68 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 GAL3ST2Q9H3Q3 398 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 GORASP2Q9H8Y8 452 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 FAM206AQ9NX38 181 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 GLS2Q9UI32 602 aa9.21□□□□□ -0.94
CDK9-205ENST00000498339 TMEM82A0PJX8 343 aa9.2□□□□□ -0.94
CDK9-205ENST00000498339 PQLC2LA1A4F0 135 aa9.2□□□□□ -0.94
CDK9-205ENST00000498339 ARRDC5A6NEK1 342 aa9.2□□□□□ -0.94
CDK9-205ENST00000498339 PRR23D1E9PI22 279 aaPredicted RBP9.2□□□□□ -0.94
CDK9-205ENST00000498339 HAND1O96004 215 aa9.2□□□□□ -0.94
CDK9-205ENST00000498339 IGHA1P01876 353 aa9.2□□□□□ -0.94
CDK9-205ENST00000498339 PRR23D2P0DMB1 279 aaPredicted RBP9.2□□□□□ -0.94
CDK9-205ENST00000498339 CDK2P24941 298 aa9.2□□□□□ -0.94
CDK9-205ENST00000498339 SNU13P55769 128 aaKnown RBP9.2□□□□□ -0.94
CDK9-205ENST00000498339 BDH1Q02338 343 aa9.2□□□□□ -0.94
CDK9-205ENST00000498339 PPP1R8Q12972 351 aaKnown RBP9.2□□□□□ -0.94
CDK9-205ENST00000498339 IL24Q13007 206 aa9.2□□□□□ -0.94
CDK9-205ENST00000498339 ZNF829Q3KNS6 432 aaPredicted RBP9.2□□□□□ -0.94
CDK9-205ENST00000498339 ZNF260Q3ZCT1 412 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms