RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 SIRPAP78324 504 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 MRPS10P82664 201 aaKnown RBP5.4□□□□□ -1.54
SSBP1-213ENST00000496622 SMIM21Q3B7S5 101 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 SLC25A35Q3KQZ1 300 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 TMEM177Q53S58 311 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 CDCP2Q5VXM1 449 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 SLC22A10Q63ZE4 541 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 TMEM225Q6GV28 225 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 ESPNLQ6ZVH7 1005 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 C5orf24Q7Z6I8 188 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 LYG2Q86SG7 212 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 OR13D1Q8NGV5 346 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 OR8U1Q8NH10 309 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 ABHD4Q8TB40 342 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 THAP6Q8TBB0 222 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 SLC25A46Q96AG3 418 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 LIN37Q96GY3 246 aaPredicted RBP5.4□□□□□ -1.54
SSBP1-213ENST00000496622 SIGLEC12Q96PQ1 595 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 CHST5Q9GZS9 411 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 RAB1BQ9H0U4 201 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 RNF122Q9H9V4 155 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 TRIM36Q9NQ86 728 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 PTTG3PQ9NZH4 202 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 B3GAT1Q9P2W7 334 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 MRM2Q9UI43 246 aaKnown RBP5.4□□□□□ -1.54
SSBP1-213ENST00000496622 CSAG2Q9Y5P2 127 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 HECTD1Q9ULT8 2610 aa5.4□□□□□ -1.54
SSBP1-213ENST00000496622 KALRNO60229 2985 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 FBN2P35556 2912 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 CCDC187A0A096LP49 1063 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 OR2M5A3KFT3 312 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 LIPT2A6NK58 231 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 TRDCB7Z8K6 153 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 DISC1C4P0D8 188 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 TNFRSF6BO95407 300 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 HLA-DPB1P04440 258 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 GABRR1P24046 479 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 EDNRAP25101 427 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 OR3A1P47881 315 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 BIDP55957 195 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 CLDN12P56749 244 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 RPL27P61353 136 aaKnown RBP5.4□□□□□ -1.55
SSBP1-213ENST00000496622 RPS11P62280 158 aaKnown RBP eCLIP5.4□□□□□ -1.55
SSBP1-213ENST00000496622 RBPJQ06330 500 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 IL18Q14116 193 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 CSRP2Q16527 193 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 ACSM3Q53FZ2 586 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 STPG1Q5TH74 334 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 CD200R1LQ6Q8B3 271 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 CCDC190Q86UF4 302 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 SERPINA12Q8IW75 414 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 BAP18Q8IXM2 172 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 OR2T27Q8NH04 317 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 SCARB1Q8WTV0 552 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 THAP4Q8WY91 577 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 CREB3L1Q96BA8 519 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 HARBI1Q96MB7 349 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 TSNAXQ99598 290 aaKnown RBP5.4□□□□□ -1.55
SSBP1-213ENST00000496622 ADAT1Q9BUB4 502 aaKnown RBP5.4□□□□□ -1.55
SSBP1-213ENST00000496622 SLC25A18Q9H1K4 315 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 GEMIN7Q9H840 131 aaKnown RBP5.4□□□□□ -1.55
SSBP1-213ENST00000496622 OBP2BQ9NPH6 170 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 HAO2Q9NYQ3 351 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 ST6GALNAC2Q9UJ37 374 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 B9D1Q9UPM9 204 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 PSG11Q9UQ72 335 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 SLC22A13Q9Y226 551 aa5.4□□□□□ -1.55
SSBP1-213ENST00000496622 M0R233 179 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 TNFSF11O14788 317 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 CCL25O15444 150 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 LANCL1O43813 399 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 WISP2O76076 250 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 CD2P06729 351 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 CSF3P09919 207 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 FTH1P19P0C7X4 201 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 IRF2P14316 349 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 APOBEC1P41238 236 aaKnown RBP5.39□□□□□ -1.55
SSBP1-213ENST00000496622 RAB25P57735 213 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 CD81P60033 236 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 ADAM8P78325 824 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 HSF1Q00613 529 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 ZNF79Q15937 498 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 EXT1Q16394 746 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 LGALSLQ3ZCW2 172 aaPredicted RBP5.39□□□□□ -1.55
SSBP1-213ENST00000496622 IDNKQ5T6J7 187 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 TRIQKQ629K1 86 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 H1FNTQ75WM6 255 aaPredicted RBP5.39□□□□□ -1.55
SSBP1-213ENST00000496622 COMMD1Q8N668 190 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 DNAAF1Q8NEP3 725 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 C1orf162Q8NEQ5 155 aaPredicted RBP5.39□□□□□ -1.55
SSBP1-213ENST00000496622 OR11H4Q8NGC9 324 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 OR56B1Q8NGI3 324 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 ST8SIA1Q92185 356 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 TOMM40LQ969M1 308 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 POM121L2Q96KW2 1035 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 PHB2Q99623 299 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 CCDC32Q9BV29 185 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 SLITRK2Q9H156 845 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 SEC61A2Q9H9S3 476 aa5.39□□□□□ -1.55
SSBP1-213ENST00000496622 WFDC1Q9HC57 220 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms