RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 DGUOKQ16854 277 aa15.36■□□□□ 0.05
TSSC4-210ENST00000496468 SLC22A6Q4U2R8 563 aa15.36■□□□□ 0.05
TSSC4-210ENST00000496468 HES5Q5TA89 166 aa15.36■□□□□ 0.05
TSSC4-210ENST00000496468 STUMQ69YW2 141 aa15.36■□□□□ 0.05
TSSC4-210ENST00000496468 SFXN4Q6P4A7 337 aa15.36■□□□□ 0.05
TSSC4-210ENST00000496468 NR2C2APQ86WQ0 139 aa15.36■□□□□ 0.05
TSSC4-210ENST00000496468 LRRC28Q86X40 367 aaPredicted RBP15.36■□□□□ 0.05
TSSC4-210ENST00000496468 FAM58AQ8N1B3 248 aa15.36■□□□□ 0.05
TSSC4-210ENST00000496468 GHRLQ9UBU3 117 aa15.36■□□□□ 0.05
TSSC4-210ENST00000496468 NOTCH2Q04721 2471 aa15.36■□□□□ 0.05
TSSC4-210ENST00000496468 CCDC168Q8NDH2 2452 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 IGHV4-61A0A0C4DH41 118 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 A0A0G2JK05 382 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 CCDC160A6NGH7 325 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 IFITM5A6NNB3 132 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 OR2AT4A6NND4 320 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 CEACAM18A8MTB9 384 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 HTR3BO95264 441 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 BPNT1O95861 308 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 KNG1P01042 644 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 IL1AP01583 271 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 GYPAP02724 150 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 CD37P11049 281 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 CFPP27918 469 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 RANBP1P43487 201 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 SNU13P55769 128 aaKnown RBP15.35■□□□□ 0.05
TSSC4-210ENST00000496468 CAV3P56539 151 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 FGF12P61328 243 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 GPR176Q14439 515 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 FAM166AQ6J272 317 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 ASCL4Q6XD76 172 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 DCDC5Q6ZRR9 648 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 USP43Q70EL4 1123 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 NDNFQ8TB73 568 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 ISOC1Q96CN7 298 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 TMEM246Q9BRR3 403 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 CST11Q9H112 138 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 TMEM165Q9HC07 324 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 HMG20AQ9NP66 347 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 PCDHB16Q9NRJ7 776 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 IL36RNQ9UBH0 155 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 STEAP1Q9UHE8 339 aa15.35■□□□□ 0.05
TSSC4-210ENST00000496468 RNF223E7ERA6 249 aa15.34■□□□□ 0.05
TSSC4-210ENST00000496468 CALCBP10092 127 aa15.34■□□□□ 0.05
TSSC4-210ENST00000496468 RPS2P15880 293 aaKnown RBP15.34■□□□□ 0.05
TSSC4-210ENST00000496468 USF1P22415 310 aaPredicted RBP15.34■□□□□ 0.05
TSSC4-210ENST00000496468 CLDN12P56749 244 aa15.34■□□□□ 0.05
TSSC4-210ENST00000496468 SPIN3Q5JUX0 258 aa15.34■□□□□ 0.05
TSSC4-210ENST00000496468 ELP2Q6IA86 826 aa15.34■□□□□ 0.05
TSSC4-210ENST00000496468 CLDND2Q8NHS1 167 aa15.34■□□□□ 0.05
TSSC4-210ENST00000496468 RAB39BQ96DA2 213 aa15.34■□□□□ 0.05
TSSC4-210ENST00000496468 C1orf147Q96MC9 270 aaPredicted RBP15.34■□□□□ 0.05
TSSC4-210ENST00000496468 OR14J1Q9UGF5 321 aa15.34■□□□□ 0.05
TSSC4-210ENST00000496468 DAPK2Q9UIK4 370 aa15.34■□□□□ 0.05
TSSC4-210ENST00000496468 PCDHB10Q9UN67 800 aa15.34■□□□□ 0.05
TSSC4-210ENST00000496468 NDUFA2O43678 99 aa15.33■□□□□ 0.04
TSSC4-210ENST00000496468 CRTAPO75718 401 aaPredicted RBP15.33■□□□□ 0.04
TSSC4-210ENST00000496468 HEXAP06865 529 aa15.33■□□□□ 0.04
TSSC4-210ENST00000496468 PSG2P11465 335 aa15.33■□□□□ 0.04
TSSC4-210ENST00000496468 GTF2F2P13984 249 aa15.33■□□□□ 0.04
TSSC4-210ENST00000496468 ARSBP15848 533 aa15.33■□□□□ 0.04
TSSC4-210ENST00000496468 CAPZA1P52907 286 aa15.33■□□□□ 0.04
TSSC4-210ENST00000496468 NLRC3Q7RTR2 1065 aa15.33■□□□□ 0.04
TSSC4-210ENST00000496468 OSR2Q8N2R0 312 aa15.33■□□□□ 0.04
TSSC4-210ENST00000496468 OR5T2Q8NGG2 359 aa15.33■□□□□ 0.04
TSSC4-210ENST00000496468 ANGPTL6Q8NI99 470 aa15.33■□□□□ 0.04
TSSC4-210ENST00000496468 FAM46BQ96A09 425 aa15.33■□□□□ 0.04
TSSC4-210ENST00000496468 SLC25A28Q96A46 364 aa15.33■□□□□ 0.04
TSSC4-210ENST00000496468 REG4Q9BYZ8 158 aa15.33■□□□□ 0.04
TSSC4-210ENST00000496468 DCSTAMPQ9H295 470 aa15.33■□□□□ 0.04
TSSC4-210ENST00000496468 KCNK15Q9H427 330 aa15.33■□□□□ 0.04
TSSC4-210ENST00000496468 LIN7BQ9HAP6 207 aa15.33■□□□□ 0.04
TSSC4-210ENST00000496468 GLS2Q9UI32 602 aa15.33■□□□□ 0.04
TSSC4-210ENST00000496468 CEPT1Q9Y6K0 416 aa15.33■□□□□ 0.04
TSSC4-210ENST00000496468 IGKV1D-17A0A075B6S4 117 aa15.32■□□□□ 0.04
TSSC4-210ENST00000496468 A0A096LNT2 108 aa15.32■□□□□ 0.04
TSSC4-210ENST00000496468 A0A1W2PP11 408 aa15.32■□□□□ 0.04
TSSC4-210ENST00000496468 RFPL4AA6NLU0 287 aa15.32■□□□□ 0.04
TSSC4-210ENST00000496468 RFPL4AL1F8VTS6 287 aa15.32■□□□□ 0.04
TSSC4-210ENST00000496468 H3BMQ9 156 aa15.32■□□□□ 0.04
TSSC4-210ENST00000496468 TMPRSS2O15393 492 aa15.32■□□□□ 0.04
TSSC4-210ENST00000496468 ADAM20O43506 726 aa15.32■□□□□ 0.04
TSSC4-210ENST00000496468 IGHV2-5P01817 119 aa15.32■□□□□ 0.04
TSSC4-210ENST00000496468 SLC2A2P11168 524 aaPredicted RBP15.32■□□□□ 0.04
TSSC4-210ENST00000496468 GABRA2P47869 451 aa15.32■□□□□ 0.04
TSSC4-210ENST00000496468 CEBPDP49716 269 aaPredicted RBP15.32■□□□□ 0.04
TSSC4-210ENST00000496468 RBM11P57052 281 aaKnown RBP15.32■□□□□ 0.04
TSSC4-210ENST00000496468 IL13RA2Q14627 380 aa15.32■□□□□ 0.04
TSSC4-210ENST00000496468 PIGYQ3MUY2 71 aa15.32■□□□□ 0.04
TSSC4-210ENST00000496468 SLC36A1Q7Z2H8 476 aa15.32■□□□□ 0.04
TSSC4-210ENST00000496468 CROCCP3Q8IVE0 287 aa15.32■□□□□ 0.04
TSSC4-210ENST00000496468 Q8NFD4 153 aa15.32■□□□□ 0.04
TSSC4-210ENST00000496468 OR8B3Q8NGG8 313 aa15.32■□□□□ 0.04
TSSC4-210ENST00000496468 FAM3DQ96BQ1 224 aa15.32■□□□□ 0.04
TSSC4-210ENST00000496468 OR8B2Q96RD0 313 aa15.32■□□□□ 0.04
TSSC4-210ENST00000496468 RBM38Q9H0Z9 239 aaKnown RBP15.32■□□□□ 0.04
TSSC4-210ENST00000496468 DNTTIP1Q9H147 329 aa15.32■□□□□ 0.04
TSSC4-210ENST00000496468 ZNF665Q9H7R5 613 aa15.32■□□□□ 0.04
TSSC4-210ENST00000496468 MIOXQ9UGB7 285 aa15.32■□□□□ 0.04
TSSC4-210ENST00000496468 ZNF222Q9UK12 451 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms