RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 RPL23AP62750 156 aaKnown RBP7.97□□□□□ -1.13
HPS4-217ENST00000496385 DEGS2Q6QHC5 323 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 TEX43Q6ZNM6 134 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 OR5T1Q8NG75 326 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 OR13G1Q8NGZ3 307 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 SLC35E1Q96K37 410 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 TSSK2Q96PF2 358 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 TECTBQ96PL2 329 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 REPIN1Q9BWE0 567 aaKnown RBP7.97□□□□□ -1.13
HPS4-217ENST00000496385 RAB11FIP5Q9BXF6 653 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 GPR35Q9HC97 309 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.97□□□□□ -1.13
HPS4-217ENST00000496385 SERINC1Q9NRX5 453 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 CISD1Q9NZ45 108 aaKnown RBP7.97□□□□□ -1.13
HPS4-217ENST00000496385 GRHPRQ9UBQ7 328 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 NDUFS8O00217 210 aa7.96□□□□□ -1.13
HPS4-217ENST00000496385 VSIG8P0DPA2 414 aa7.96□□□□□ -1.13
HPS4-217ENST00000496385 TDGF1P13385 188 aa7.96□□□□□ -1.13
HPS4-217ENST00000496385 CEACAM1P13688 526 aa7.96□□□□□ -1.13
HPS4-217ENST00000496385 SELEP16581 610 aa7.96□□□□□ -1.13
HPS4-217ENST00000496385 PTTG1IPP53801 180 aa7.96□□□□□ -1.13
HPS4-217ENST00000496385 ELLP55199 621 aaPredicted RBP7.96□□□□□ -1.13
HPS4-217ENST00000496385 RAB38P57729 211 aa7.96□□□□□ -1.13
HPS4-217ENST00000496385 CTXN1P60606 82 aa7.96□□□□□ -1.13
HPS4-217ENST00000496385 TMEM183BQ1AE95 376 aa7.96□□□□□ -1.13
HPS4-217ENST00000496385 ALG10Q5BKT4 473 aa7.96□□□□□ -1.13
HPS4-217ENST00000496385 FAM90A2PQ658T7 463 aa7.96□□□□□ -1.13
HPS4-217ENST00000496385 CISD2Q8N5K1 135 aaKnown RBP7.96□□□□□ -1.13
HPS4-217ENST00000496385 LRTM2Q8N967 370 aa7.96□□□□□ -1.13
HPS4-217ENST00000496385 PRSS33Q8NF86 280 aa7.96□□□□□ -1.13
HPS4-217ENST00000496385 PTPMT1Q8WUK0 201 aaPredicted RBP7.96□□□□□ -1.13
HPS4-217ENST00000496385 HOXB13Q92826 284 aaPredicted RBP7.96□□□□□ -1.13
HPS4-217ENST00000496385 COL26A1Q96A83 441 aa7.96□□□□□ -1.13
HPS4-217ENST00000496385 LPAR4Q99677 370 aa7.96□□□□□ -1.13
HPS4-217ENST00000496385 RBKSQ9H477 322 aa7.96□□□□□ -1.13
HPS4-217ENST00000496385 CNTD2Q9H8S5 307 aa7.96□□□□□ -1.13
HPS4-217ENST00000496385 GLRX2Q9NS18 164 aa7.96□□□□□ -1.13
HPS4-217ENST00000496385 LYRM2Q9NU23 88 aaPredicted RBP7.96□□□□□ -1.13
HPS4-217ENST00000496385 PRR13Q9NZ81 148 aa7.96□□□□□ -1.13
HPS4-217ENST00000496385 SPEGQ15772 3267 aa7.96□□□□□ -1.13
HPS4-217ENST00000496385 SCN2AQ99250 2005 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 IGKV1-8A0A0C4DH67 115 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 NKX2-2O95096 273 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 PNPP00491 289 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 SP9P0CG40 484 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 CT45A8P0DMV1 189 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 CT45A9P0DMV2 189 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 HIST1H1DP16402 221 aaKnown RBP7.96□□□□□ -1.14
HPS4-217ENST00000496385 CHRNB4P30926 498 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 SFTPDP35247 375 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 CEBPGP53567 150 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 MTCP1P56278 107 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 RPS20P60866 119 aaKnown RBP7.96□□□□□ -1.14
HPS4-217ENST00000496385 UBE2NP61088 152 aaKnown RBP7.96□□□□□ -1.14
HPS4-217ENST00000496385 IL24Q13007 206 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 ELAVL3Q14576 367 aaKnown RBP7.96□□□□□ -1.14
HPS4-217ENST00000496385 ARL6IP1Q15041 203 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 CST6Q15828 149 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 CT45A2Q5DJT8 189 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 ACTL10Q5JWF8 245 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 OR8G2PQ6IF36 304 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 OR2A1Q8NGT9 310 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 GPR119Q8TDV5 335 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 OIT3Q8WWZ8 545 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 ZCCHC14Q8WYQ9 949 aaKnown RBP7.96□□□□□ -1.14
HPS4-217ENST00000496385 MOB3AQ96BX8 217 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 TP53RKQ96S44 253 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 SERINC2Q96SA4 455 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 SEPSECSQ9HD40 501 aaKnown RBP7.96□□□□□ -1.14
HPS4-217ENST00000496385 Q9N2K0 584 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 DECR2Q9NUI1 292 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 FBXO34Q9NWN3 711 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 CFAP54Q96N23 3096 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 DOCK9Q9BZ29 2069 aa7.96□□□□□ -1.14
HPS4-217ENST00000496385 NPIPA5A0A0B4J1W7 369 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 CLEC18AA5D8T8 446 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 CRYM-AS1A6NIL9 109 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 NPIPA7E9PJI5 369 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 ST8SIA3O43173 380 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 GALR2O43603 387 aaPredicted RBP7.95□□□□□ -1.14
HPS4-217ENST00000496385 PITX3O75364 302 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 SYNGR4O95473 234 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 KNG1P01042 644 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 NPIPA8P0DM63 369 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 CPMP14384 443 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 AMY2BP19961 511 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 PTGER4P35408 488 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 EMP2P54851 167 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 FOXK1P85037 733 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 DPTQ07507 201 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 TCF15Q12870 199 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 UBE2V1Q13404 147 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 RUNX2Q13950 521 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 ACSF3Q4G176 576 aaPredicted RBP7.95□□□□□ -1.14
HPS4-217ENST00000496385 RTL6Q6ICC9 239 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 ZNF440Q8IYI8 595 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 CLEC18CQ8NCF0 446 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 OR5B12Q96R08 314 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 WWTR1Q9GZV5 400 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 ZNF700Q9H0M5 742 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms