RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 TUBA4BQ9H853 241 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 SMCO4Q9NRQ5 59 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 TIMM10BQ9Y5J6 103 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 KIAA1549Q9HCM3 1950 aa10.03□□□□□ -0.8
RFC4-214ENST00000494047 A0A1B0GW64 132 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 C1QTNF9BB2RNN3 333 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 UMAD1C9J7I0 102 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 F5H5K5 113 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 GPR137BO60478 399 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 MED6O75586 246 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 PLATP00750 562 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 C1QTNF9P0C862 333 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 OR5H8P0DN80 308 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 TMEM225BP0DP42 221 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 HKR1P10072 659 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 RAB5BP61020 215 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 GNMTQ14749 295 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 KRTAP27-1Q3LI81 207 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 RNF212Q495C1 297 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 AVPI1Q5T686 147 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 HES3Q5TGS1 186 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 ZNF574Q6ZN55 896 aaPredicted RBP10.02□□□□□ -0.8
RFC4-214ENST00000494047 DPPA2Q7Z7J5 298 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 PUSL1Q8N0Z8 303 aaKnown RBP10.02□□□□□ -0.8
RFC4-214ENST00000494047 TMEM156Q8N614 296 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 OR2Y1Q8NGV0 311 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 OR1F12Q8NHA8 337 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 IMMP1LQ96LU5 166 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 DMRTA2Q96SC8 542 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 ARV1Q9H2C2 271 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 RIMS4Q9H426 269 aaPredicted RBP10.02□□□□□ -0.8
RFC4-214ENST00000494047 ELL3Q9HB65 397 aaPredicted RBP10.02□□□□□ -0.8
RFC4-214ENST00000494047 SH2D2AQ9NP31 389 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 PLSCR2Q9NRY7 297 aa10.02□□□□□ -0.8
RFC4-214ENST00000494047 RCC2Q9P258 522 aaKnown RBP10.02□□□□□ -0.8
RFC4-214ENST00000494047 IGF2RP11717 2491 aa10.02□□□□□ -0.81
RFC4-214ENST00000494047 NSG1A0A0A6YYJ2 146 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 LY6G6EA0A0G2JKS1 128 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 ZNF816-ZNF321PA0A0X1KG74 233 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 C2orf72A6NCS6 295 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 H0YIZ8 118 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 MT-CO3P00414 261 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 P04436 131 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 CD5P06127 495 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 SFTPBP07988 381 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 ATXN8OSP0DMR3 200 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 SLC2A1P11166 492 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 FAHP16930 419 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 TCN2P20062 427 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 FOLR3P41439 243 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 CLDN15P56746 228 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 HERV-K104P61576 105 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 RAB1AP62820 205 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 CCL7P80098 99 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 MALLQ13021 153 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 CHAF1BQ13112 559 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 UBE2V2Q15819 145 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 GUSBP11Q6P575 273 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 LIAT1Q6ZQX7 453 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 RPS19BP1Q86WX3 136 aaKnown RBP10.01□□□□□ -0.81
RFC4-214ENST00000494047 LSRQ86X29 649 aaPredicted RBP10.01□□□□□ -0.81
RFC4-214ENST00000494047 OSR2Q8N2R0 312 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 LRRC18Q8N456 261 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 IFI44Q8TCB0 444 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 GTF3AQ92664 365 aaKnown RBP10.01□□□□□ -0.81
RFC4-214ENST00000494047 PIGTQ969N2 578 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 CPNE4Q96A23 557 aaPredicted RBP10.01□□□□□ -0.81
RFC4-214ENST00000494047 TMEM45BQ96B21 275 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 REEP6Q96HR9 211 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 ZPBPQ9BS86 351 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 RBM24Q9BX46 236 aaKnown RBP10.01□□□□□ -0.81
RFC4-214ENST00000494047 PRDM14Q9GZV8 571 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 MS4A7Q9GZW8 240 aaPredicted RBP10.01□□□□□ -0.81
RFC4-214ENST00000494047 PLK3Q9H4B4 646 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 RNF122Q9H9V4 155 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 SPACA1Q9HBV2 294 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 U3KQA8 63 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 ALPK2Q86TB3 2170 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 KIR2DS1A0A191URI9 304 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 A0A1W2PQM1 296 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 ZNF850A8MQ14 1090 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 RNASEK-C17orf49H0YIS7 233 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 H7C1Q1 480 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 ST8SIA3O43173 380 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 HSPA12AO43301 675 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 SYNGR3O43761 229 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 PDCD6O75340 191 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 ADAP1O75689 374 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 HTR3BO95264 441 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 DIRAS3O95661 229 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 ACTL6AO96019 429 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 KNG1P01042 644 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 S100A8P05109 93 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 FCGR3AP08637 254 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 HOXB5P09067 269 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 COX5BP10606 129 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 COX6A1P12074 109 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 HOXB1P14653 301 aaPredicted RBP10.01□□□□□ -0.81
RFC4-214ENST00000494047 ZNF708P17019 499 aa10.01□□□□□ -0.81
RFC4-214ENST00000494047 CHATP28329 748 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms