RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 RAB3CQ96E17 227 aa11.99□□□□□ -0.49
VCP-207ENST00000493886 CHTOPQ9Y3Y2 248 aaKnown RBP11.99□□□□□ -0.49
VCP-207ENST00000493886 TIMM10BQ9Y5J6 103 aa11.99□□□□□ -0.49
VCP-207ENST00000493886 TTC28Q96AY4 2481 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 IGKV3D-15A0A087WSY6 115 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 IFNA4P05014 189 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 CD46P15529 392 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 HTR5AP47898 357 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 PLAC9Q5JTB6 97 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 GALNTL5Q7Z4T8 443 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 C1QL2Q7Z5L3 287 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 SLC25A42Q86VD7 318 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 OR1S2Q8NGQ3 325 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 FGFBP3Q8TAT2 258 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 THAP6Q8TBB0 222 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 PHB2Q99623 299 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 URM1Q9BTM9 101 aaKnown RBP11.98□□□□□ -0.49
VCP-207ENST00000493886 OR2H1Q9GZK4 316 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 SLC25A32Q9H2D1 315 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 KMT2EQ8IZD2 1858 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 MRPL33O75394 65 aaKnown RBP11.98□□□□□ -0.49
VCP-207ENST00000493886 IGHV3-9P01782 118 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 GSTP1P09211 210 aaKnown RBP11.98□□□□□ -0.49
VCP-207ENST00000493886 FCGR2AP12318 317 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 PGAM2P15259 253 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 RPS2P15880 293 aaKnown RBP11.98□□□□□ -0.49
VCP-207ENST00000493886 HIST1H1DP16402 221 aaKnown RBP11.98□□□□□ -0.49
VCP-207ENST00000493886 ZNF708P17019 499 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 SERPINF1P36955 418 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 ALDH3B1P43353 468 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 TMEM50BP56557 158 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 TSPO2Q5TGU0 170 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 PLXDC2Q6UX71 529 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 SKA3Q8IX90 412 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 SUMF1Q8NBK3 374 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 SEMA6DQ8NFY4 1073 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 OR5T2Q8NGG2 359 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 OR56B1Q8NGI3 324 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 PIGTQ969N2 578 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 REEP6Q96HR9 211 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 BARX1Q9HBU1 254 aaPredicted RBP11.98□□□□□ -0.49
VCP-207ENST00000493886 SLC2A8Q9NY64 477 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 PCDHB10Q9UN67 800 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 CACNA1HO95180 2353 aa11.98□□□□□ -0.49
VCP-207ENST00000493886 LCATP04180 440 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 ACKR3P25106 362 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 PCBD1P61457 104 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 SNTB1Q13884 538 aaKnown RBP11.97□□□□□ -0.49
VCP-207ENST00000493886 KRTAP27-1Q3LI81 207 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 TMEM88Q6PEY1 159 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 INO80EQ8NBZ0 244 aaPredicted RBP11.97□□□□□ -0.49
VCP-207ENST00000493886 RNASE11Q8TAA1 199 aaKnown RBP11.97□□□□□ -0.49
VCP-207ENST00000493886 DCUN1D4Q92564 292 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 HAS2Q92819 552 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 OR51B6Q9H340 312 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 WASF3Q9UPY6 502 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 CSAG2Q9Y5P2 127 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 DMRT1Q9Y5R6 373 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 A0A0B4J2A0 478 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 MARCH11A6NNE9 402 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 MPTX1A8MV57 137 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 ADAP1O75689 374 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 SP1P08047 785 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 MUC1P15941 1255 aaPredicted RBP11.97□□□□□ -0.49
VCP-207ENST00000493886 PPIAP62937 165 aaKnown RBP11.97□□□□□ -0.49
VCP-207ENST00000493886 ATP1A1-AS1Q5TC04 95 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 ACOT7LQ6ZUV0 252 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 OR4K15Q8NH41 348 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 SHPKQ9UHJ6 478 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 KLF13Q9Y2Y9 288 aaPredicted RBP11.97□□□□□ -0.49
VCP-207ENST00000493886 URB1O60287 2271 aaKnown RBP11.97□□□□□ -0.49
VCP-207ENST00000493886 DHRS7CA6NNS2 312 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 GPR31O00270 319 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 SNAPC5O75971 98 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 OR2F2O95006 317 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 SYNGR4O95473 234 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 MPZP25189 248 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 MEOX1P50221 254 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 OR2F1Q13607 317 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 PABPC1L2AQ5JQF8 200 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 MDS2Q8NDY4 140 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 OR51T1Q8NGJ9 327 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 MITD1Q8WV92 249 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 MYOZ1Q9NP98 299 aaPredicted RBP11.97□□□□□ -0.49
VCP-207ENST00000493886 GPR173Q9NS66 373 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 GAB2Q9UQC2 676 aa11.97□□□□□ -0.49
VCP-207ENST00000493886 SDCBPO00560 298 aaPredicted RBP11.96□□□□□ -0.49
VCP-207ENST00000493886 NME2P1O60361 137 aa11.96□□□□□ -0.49
VCP-207ENST00000493886 FARS2O95363 451 aaKnown RBP11.96□□□□□ -0.49
VCP-207ENST00000493886 SPP1P10451 314 aa11.96□□□□□ -0.49
VCP-207ENST00000493886 NME2P22392 152 aa11.96□□□□□ -0.49
VCP-207ENST00000493886 SNRPEP62304 92 aaKnown RBP11.96□□□□□ -0.49
VCP-207ENST00000493886 MICBQ29980 383 aa11.96□□□□□ -0.49
VCP-207ENST00000493886 MOB3CQ70IA8 216 aa11.96□□□□□ -0.49
VCP-207ENST00000493886 PIP4P1Q86T03 277 aa11.96□□□□□ -0.49
VCP-207ENST00000493886 FOXRED2Q8IWF2 684 aa11.96□□□□□ -0.49
VCP-207ENST00000493886 FAM89BQ8N5H3 189 aa11.96□□□□□ -0.49
VCP-207ENST00000493886 ARHGAP5-AS1Q96IT6 56 aa11.96□□□□□ -0.49
VCP-207ENST00000493886 TMEM231Q9H6L2 316 aa11.96□□□□□ -0.49
VCP-207ENST00000493886 ZNF407Q9C0G0 2248 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms