RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 LYPD6Q86Y78 171 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 FGFRL1Q8N441 504 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 OR4D6Q8NGJ1 314 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 ANGPTL6Q8NI99 470 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 EMG1Q92979 244 aaKnown RBP14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 RAB39BQ96DA2 213 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 MSI2Q96DH6 328 aaKnown RBP14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 CPNE2Q96FN4 548 aaPredicted RBP14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 SLITRK2Q9H156 845 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 GSX1Q9H4S2 264 aaPredicted RBP14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 RASL12Q9NYN1 266 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 SSR3Q9UNL2 185 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 FCN3O75636 299 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 KDM4BO94953 1096 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 HEXAP06865 529 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 PRKACAP17612 351 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 ZFP36P26651 326 aaKnown RBP14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 LCN2P80188 198 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 IKZF1Q13422 519 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 FAM58AQ8N1B3 248 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 CD177Q8N6Q3 437 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 NKAIN3Q8N8D7 197 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 PNLDC1Q8NA58 520 aaKnown RBP14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 ZSCAN4Q8NAM6 433 aaPredicted RBP14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 C12orf43Q96C57 262 aaKnown RBP14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 YIPF6Q96EC8 236 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 MIOXQ9UGB7 285 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 METRNQ9UJH8 293 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 SMIM30A4D0T7 59 aa14.89□□□□□ -0.03
PDLIM7-208ENST00000493815 MEGF11A6BM72 1044 aa14.89□□□□□ -0.03
PDLIM7-208ENST00000493815 F5H0A9 414 aaPredicted RBP14.89□□□□□ -0.03
PDLIM7-208ENST00000493815 Q71RC1 249 aaPredicted RBP14.89□□□□□ -0.03
PDLIM7-208ENST00000493815 SAXO1Q8IYX7 474 aa14.89□□□□□ -0.03
PDLIM7-208ENST00000493815 OR8B3Q8NGG8 313 aa14.89□□□□□ -0.03
PDLIM7-208ENST00000493815 NEIL1Q96FI4 390 aaPredicted RBP14.89□□□□□ -0.03
PDLIM7-208ENST00000493815 GAFA1Q96PS6 74 aa14.89□□□□□ -0.03
PDLIM7-208ENST00000493815 OR8B2Q96RD0 313 aa14.89□□□□□ -0.03
PDLIM7-208ENST00000493815 CENPOQ9BU64 300 aa14.89□□□□□ -0.03
PDLIM7-208ENST00000493815 ZNF222Q9UK12 451 aa14.89□□□□□ -0.03
PDLIM7-208ENST00000493815 MRPS28Q9Y2Q9 187 aaKnown RBP14.89□□□□□ -0.03
PDLIM7-208ENST00000493815 YLPM1P49750 1951 aaKnown RBP14.88□□□□□ -0.03
PDLIM7-208ENST00000493815 ABCA1O95477 2261 aa14.88□□□□□ -0.03
PDLIM7-208ENST00000493815 TLN2Q9Y4G6 2542 aa14.88□□□□□ -0.03
PDLIM7-208ENST00000493815 LY6G6DO95868 133 aa14.88□□□□□ -0.03
PDLIM7-208ENST00000493815 TFAP2AP05549 437 aa14.88□□□□□ -0.03
PDLIM7-208ENST00000493815 ZNF16P17020 682 aaPredicted RBP14.88□□□□□ -0.03
PDLIM7-208ENST00000493815 GALP22466 123 aa14.88□□□□□ -0.03
PDLIM7-208ENST00000493815 FGF9P31371 208 aaPredicted RBP14.88□□□□□ -0.03
PDLIM7-208ENST00000493815 TGFBR1P36897 503 aa14.88□□□□□ -0.03
PDLIM7-208ENST00000493815 PITPNBP48739 271 aa14.88□□□□□ -0.03
PDLIM7-208ENST00000493815 OR10A3P58181 314 aa14.88□□□□□ -0.03
PDLIM7-208ENST00000493815 PDCD1Q15116 288 aa14.88□□□□□ -0.03
PDLIM7-208ENST00000493815 RSU1Q15404 277 aa14.88□□□□□ -0.03
PDLIM7-208ENST00000493815 GLIPR1L1Q6UWM5 242 aa14.88□□□□□ -0.03
PDLIM7-208ENST00000493815 ZNF841Q6ZN19 808 aa14.88□□□□□ -0.03
PDLIM7-208ENST00000493815 NLRC3Q7RTR2 1065 aa14.88□□□□□ -0.03
PDLIM7-208ENST00000493815 Q8IYB0 196 aa14.88□□□□□ -0.03
PDLIM7-208ENST00000493815 ZNRF1Q8ND25 227 aa14.88□□□□□ -0.03
PDLIM7-208ENST00000493815 PXT1Q8NFP0 134 aa14.88□□□□□ -0.03
PDLIM7-208ENST00000493815 HMG20AQ9NP66 347 aa14.88□□□□□ -0.03
PDLIM7-208ENST00000493815 GSTK1Q9Y2Q3 226 aa14.88□□□□□ -0.03
PDLIM7-208ENST00000493815 A0A1W2PP11 408 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 DVL1O14640 695 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 NDUFA2O43678 99 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 HTR3BO95264 441 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 TGFAP01135 160 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 FOSL1P15407 271 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 SERPINA2P20848 420 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 MYL9P24844 172 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 PRDX2P32119 198 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 LSM3P62310 102 aaKnown RBP14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 DGUOKQ16854 277 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 SLC22A6Q4U2R8 563 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 ESCO2Q56NI9 601 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 GLT8D1Q68CQ7 371 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 CYB5R2Q6BCY4 276 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 AWAT2Q6E213 333 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 METAP1DQ6UB28 335 aaPredicted RBP14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 ZNF788Q6ZQV5 615 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 OR13F1Q8NGS4 319 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 S100A13Q99584 98 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 MAB21L2Q9Y586 359 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 NKX6-3A6NJ46 265 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 KNG1P01042 644 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 GZMKP49863 264 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 GNB2P62879 340 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 ATPAF1Q5TC12 328 aaPredicted RBP14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 ASCL4Q6XD76 172 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 SLC36A1Q7Z2H8 476 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 CDH26Q8IXH8 852 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 LINC01356Q8N9X3 169 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 UQCC2Q9BRT2 126 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 FUNDC2Q9BWH2 189 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 SSBP3Q9BWW4 388 aaPredicted RBP14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 METTL9Q9H1A3 318 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 KCNK15Q9H427 330 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 CLN8Q9UBY8 286 aa14.87□□□□□ -0.03
PDLIM7-208ENST00000493815 ARHGAP32A7KAX9 2087 aa14.86□□□□□ -0.03
PDLIM7-208ENST00000493815 TRAV1-2A0A0B4J238 106 aa14.86□□□□□ -0.03
PDLIM7-208ENST00000493815 B4DSR2 109 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms